RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ACAA2P42765 397 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 SLC16A1P53985 500 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 PAGE3Q5JUK9 113 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 CXXC5Q7LFL8 322 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 BHLHA15Q7RTS1 189 aaPredicted RBP10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 SSX8Q7RTT4 187 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 KRT73Q86Y46 540 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 MSRB3Q8IXL7 192 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 WFDC11Q8NEX6 87 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 SPATA3Q8NHX4 192 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 NFKBIDQ8NI38 313 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 APH1AQ96BI3 265 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 THOC1Q96FV9 657 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 PLPPR2Q96GM1 343 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 SPATA5L1Q9BVQ7 753 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 ADAM19Q9H013 955 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 ESRP2Q9H6T0 727 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 VAPAQ9P0L0 249 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 SLAMF8Q9P0V8 285 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 PRSS50Q9UI38 385 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 DCTN4Q9UJW0 460 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 SLC9A8Q9Y2E8 581 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 GMEB1Q9Y692 573 aa10.09□□□□□ -0.79
NUDCD3-206ENST00000475952 HIVEP2P31629 2446 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 TRBV5-3A0A0A0MS03 114 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 A0A0G2JND7 137 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 ZNF814B7Z6K7 855 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 KLF4O43474 513 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 LYZL6O75951 148 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 PGM3O95394 542 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 GPIP06744 558 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 IMPDH2P12268 514 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 COX5AP20674 150 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 LOXP28300 417 aaPredicted RBP10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 PRKAR1BP31321 381 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 CDK6Q00534 326 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 SCARB2Q14108 478 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 TSC22D1Q15714 1073 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 TAB1Q15750 504 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 ACKR1Q16570 336 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 ALKBH2Q6NS38 261 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 REEP3Q6NUK4 255 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 PAQR6Q6TCH4 344 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 CLEC9AQ6UXN8 241 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 ZNF704Q6ZNC4 412 aaPredicted RBP10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 DHDDSQ86SQ9 333 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 SERPINA11Q86U17 422 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 UBE2J2Q8N2K1 259 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 CLIP4Q8N3C7 705 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 HSD17B8Q92506 261 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 ZNF775Q96BV0 537 aaPredicted RBP10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 C18orf12Q96KH6 178 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 PIP5K1AQ99755 562 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 TAPBPLQ9BX59 468 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 TMEM38AQ9H6F2 299 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 SLC52A3Q9NQ40 469 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 MRGBPQ9NV56 204 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 NDUFAF1Q9Y375 327 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 CHST2Q9Y4C5 530 aa10.08□□□□□ -0.8
NUDCD3-206ENST00000475952 ZC3H12DA2A288 527 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 A8MVM7 634 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 SMPD2O60906 423 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 MRPL33O75394 65 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 HEXAP06865 529 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 INHBBP09529 407 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 GPX2P18283 190 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 GGT1P19440 569 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 SLC6A2P23975 617 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 ADSLP30566 484 aaPredicted RBP10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 NCALDP61601 193 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 H3F3AP84243 136 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 CAPRIN1Q14444 709 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 OR7A5Q15622 319 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 STK11Q15831 433 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 OTUD3Q5T2D3 398 aaPredicted RBP10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 FBXW9Q5XUX1 488 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 CASP12Q6UXS9 341 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 CCDC103Q8IW40 242 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 LRRC75A-AS1Q8N1F1 130 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 DPP10Q8N608 796 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 HIPK4Q8NE63 616 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 BHLHE22Q8NFJ8 381 aaPredicted RBP10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 TSPEARQ8WU66 669 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 C3orf49Q96BT1 292 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 ZNF607Q96SK3 696 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 IKZF5Q9H5V7 419 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 ZNF385DQ9H6B1 395 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 PARPBPQ9NWS1 579 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 ASB6Q9NWX5 421 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 RPS6KB2Q9UBS0 482 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 MALT1Q9UDY8 824 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 SLC13A4Q9UKG4 626 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 ANGPT4Q9Y264 503 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 RNF115Q9Y4L5 304 aa10.07□□□□□ -0.8
NUDCD3-206ENST00000475952 CHD3Q12873 2000 aaKnown RBP10.06□□□□□ -0.8
NUDCD3-206ENST00000475952 PRORSD1PA6NEY8 169 aa10.06□□□□□ -0.8
NUDCD3-206ENST00000475952 LIPT2A6NK58 231 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms