RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 CLCF1Q9UBD9 225 aa12.35□□□□□ -0.43
ERGIC3-213ENST00000475211 AURKCQ9UQB9 309 aa12.35□□□□□ -0.43
ERGIC3-213ENST00000475211 ZGRF1Q86YA3 2104 aa12.35□□□□□ -0.43
ERGIC3-213ENST00000475211 TRAV36DV7A0A075B6V5 113 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 A0A1W2PRQ8 180 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 HTR3EA5X5Y0 456 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 MBD3L4A6NDZ8 208 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 MBD3L3A6NE82 208 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 MBD3L5A6NJ08 208 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 LIPT2A6NK58 231 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 CCL21O00585 134 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 EIF1BO60739 113 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 FZD7O75084 574 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 IGF2P01344 180 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 H1F0P07305 194 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 SLC35A1P78382 337 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 DGCR6Q14129 220 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 MFSD13AQ14CX5 517 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 ZNF239Q16600 458 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 FAM69AQ5T7M9 428 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 RPTNQ6XPR3 784 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 C3P1Q6ZMU1 363 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 WDR88Q6ZMY6 472 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 MFSD8Q8NHS3 518 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 MBD3L2Q8NHZ7 208 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 FNDC9Q8TBE3 224 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 TMEM239Q8WW34 195 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 DHRS1Q96LJ7 313 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 ZFP3Q96NJ6 502 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 DMRTA2Q96SC8 542 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 TTYH2Q9BSA4 534 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 KLHL4Q9C0H6 718 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 YY1AP1Q9H869 796 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 MAN2C1Q9NTJ4 1040 aa12.34□□□□□ -0.43
ERGIC3-213ENST00000475211 LRRTM2O43300 516 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 DIRAS1O95057 198 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 MT-ATP6P00846 226 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 GLI4P10075 376 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 IMPDH2P12268 514 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 ENPP1P22413 925 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 GTF2E2P29084 291 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 TIMP3P35625 211 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 AGFG1P52594 562 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 PER3P56645 1201 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 ACTR3P61158 418 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 SPIBQ01892 262 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 RIPPLY2Q5TAB7 128 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 OR2A2Q6IF42 318 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 P4HA3Q7Z4N8 544 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 NKAIN4Q8IVV8 208 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 TMEM255BQ8WV15 326 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 ACOT11Q8WXI4 607 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 KTI12Q96EK9 354 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 CHID1Q9BWS9 393 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 SRXN1Q9BYN0 137 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 PRRG4Q9BZD6 226 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 CCM2LQ9NUG4 571 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 RHCGQ9UBD6 479 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 SLC5A6Q9Y289 635 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 MED31Q9Y3C7 131 aa12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 UBR5O95071 2799 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-213ENST00000475211 GTF3C1Q12789 2109 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 ESPL1Q14674 2120 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 FTCDNL1E5RQL4 147 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 SMAD9O15198 467 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 KRT36O76013 467 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 GADD45GO95257 159 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 IL2RAP01589 272 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 MT-ND1P03886 318 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 FPR1P21462 350 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 RPS5P46782 204 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 OR2B6P58173 313 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 CCNIQ14094 377 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 GK3PQ14409 553 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 RNPS1Q15287 305 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 OR7A5Q15622 319 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 FGD3Q5JSP0 725 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 GTF2IRD2BQ6EKJ0 949 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 PPP4R4Q6NUP7 873 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 PAQR6Q6TCH4 344 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 SEM1Q6ZVN7 128 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 FCRLAQ7L513 359 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 GTF2IRD2Q86UP8 949 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 P3H2Q8IVL5 708 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 C10orf67Q8IYJ2 551 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 RNF113BQ8IZP6 322 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 SLC43A2Q8N370 569 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 RPRMLQ8N4K4 120 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 PAPD5Q8NDF8 572 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 RNF128Q8TEB7 428 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 TAAR8Q969N4 342 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 DUS3LQ96G46 650 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 NAA11Q9BSU3 229 aaPredicted RBP12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 GP6Q9HCN6 339 aa12.32□□□□□ -0.44
ERGIC3-213ENST00000475211 TESMINQ9Y4I5 508 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms