RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 TSPO2Q5TGU0 170 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 ANKFN1Q8N957 763 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 C1orf162Q8NEQ5 155 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-205ENST00000474996 C10orf105Q8TEF2 133 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 NANOS1Q8WY41 292 aaKnown RBP12.58□□□□□ -0.4
COL2A1-205ENST00000474996 DDIT4LQ96D03 193 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 NAA11Q9BSU3 229 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-205ENST00000474996 C20orf27Q9GZN8 174 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 FKRPQ9H9S5 495 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 PARPBPQ9NWS1 579 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 DCTN4Q9UJW0 460 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 AMDHD2Q9Y303 409 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 MALRD1Q5VYJ5 2156 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 ZC3H12DA2A288 527 aaKnown RBP12.57□□□□□ -0.4
COL2A1-205ENST00000474996 AGAP5A6NIR3 686 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 ATP6V1G2-DDX39BF2Z307 99 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 ZNF208O43345 1280 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 SERPINE1P05121 402 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 CHRM4P08173 479 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 MYZAPP0CAP1 466 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 ZNF16P17020 682 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-205ENST00000474996 APOBEC3AP31941 199 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-205ENST00000474996 EFNA4P52798 201 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 CHRNB3Q05901 458 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 SLC17A1Q14916 467 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 FAM174BQ3ZCQ3 159 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 RNF130Q86XS8 419 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 CMIPQ8IY22 773 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 PMM1Q92871 262 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 BEX2Q9BXY8 128 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 SLC38A1Q9H2H9 487 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 TMEM160Q9NX00 188 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 RAP2CQ9Y3L5 183 aa12.57□□□□□ -0.4
COL2A1-205ENST00000474996 E9PBE3 544 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 CSF3P09919 207 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 BMP4P12644 408 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 LBPP18428 481 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 CDH2P19022 906 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-205ENST00000474996 MPGP29372 298 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 S100A3P33764 101 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 SLC1A3P43003 542 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 CLNS1AP54105 237 aaKnown RBP12.56□□□□□ -0.4
COL2A1-205ENST00000474996 NME5P56597 212 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 PRPS1P60891 318 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 TGFBR3Q03167 851 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 DPY19L1Q2PZI1 675 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 TNFAIP8L3Q5GJ75 292 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 OTUD3Q5T2D3 398 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-205ENST00000474996 CYB5R2Q6BCY4 276 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 PAQR6Q6TCH4 344 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 PROX1Q92786 737 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 TEX37Q96LM6 180 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 CCDC115Q96NT0 180 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 ZNF385AQ96PM9 386 aaKnown RBP12.56□□□□□ -0.4
COL2A1-205ENST00000474996 TRNT1Q96Q11 434 aaKnown RBP12.56□□□□□ -0.4
COL2A1-205ENST00000474996 SORT1Q99523 831 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 BTNL2Q9UIR0 455 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 MOKQ9UQ07 419 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 PMF1-BGLAPU3KQ54 211 aa12.56□□□□□ -0.4
COL2A1-205ENST00000474996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 CFAP73A6NFT4 308 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 CCDC154A6NI56 674 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 FAAHO00519 579 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 AKR7A3O95154 331 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 F12P00748 615 aaPredicted RBP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 IL7RP16871 459 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 RPS4Y1P22090 263 aaKnown RBP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 USF1P22415 310 aaPredicted RBP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 CDKN2CP42773 168 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 SLC1A6P48664 564 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 RPL14P50914 215 aaKnown RBP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 EPS8Q12929 822 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 CEACAM7Q14002 265 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 OR7A5Q15622 319 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 HIKESHIQ53FT3 197 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 MRPL2Q5T653 305 aaKnown RBP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 KLHL24Q6TFL4 600 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 LRRC74BQ6ZQY2 392 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 AAED1Q7RTV5 226 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 ARIH2OSQ8N7S6 290 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 TMEM99Q8N816 258 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 ZIC4Q8N9L1 334 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 TMEM45BQ96B21 275 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 FBXO17Q96EF6 278 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 PANX1Q96RD7 426 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 SHARPINQ9H0F6 387 aa12.55□□□□□ -0.4
COL2A1-205ENST00000474996 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.55□□□□□ -0.4
COL2A1-205ENST00000474996 LIPT2A6NK58 231 aa12.54□□□□□ -0.4
COL2A1-205ENST00000474996 KLF11O14901 512 aa12.54□□□□□ -0.4
COL2A1-205ENST00000474996 BIRC5O15392 142 aa12.54□□□□□ -0.4
COL2A1-205ENST00000474996 WNT11O96014 354 aa12.54□□□□□ -0.4
COL2A1-205ENST00000474996 GPIP06744 558 aa12.54□□□□□ -0.4
COL2A1-205ENST00000474996 NR2F1P10589 423 aa12.54□□□□□ -0.4
COL2A1-205ENST00000474996 UQCRBP14927 111 aa12.54□□□□□ -0.4
COL2A1-205ENST00000474996 ANXA11P50995 505 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms