RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 VASH1Q7L8A9 365 aaPredicted RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 ANKRD37Q7Z713 158 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 MARCH9Q86YJ5 346 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 KLBQ86Z14 1044 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 MAML2Q8IZL2 1156 aaPredicted RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 SYS1Q8N2H4 156 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ZFP41Q8N8Y5 198 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 EXD3Q8N9H8 876 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 GATSQ8NAP1 163 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CYB561A3Q8NBI2 242 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 SDR9C7Q8NEX9 313 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ELOA3Q8NG57 546 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 OR52E2Q8NGJ4 325 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 OR2T27Q8NH04 317 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 STT3BQ8TCJ2 826 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 RPS4Y2Q8TD47 263 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 SMPDL3BQ92485 455 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 NAT6Q93015 286 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 KIAA1143Q96AT1 154 aaPredicted RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 NACC2Q96BF6 587 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ZC3H10Q96K80 434 aaKnown RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 DCLRE1CQ96SD1 692 aaKnown RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 ADOQ96SZ5 270 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 TM9SF2Q99805 663 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 KLHDC3Q9BQ90 382 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 OR51V1Q9H2C8 321 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 SYNDIG1Q9H7V2 258 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CPNE5Q9HCH3 593 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 TRIM36Q9NQ86 728 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 TOR4AQ9NXH8 423 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CTSFQ9UBX1 484 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 MUTYHQ9UIF7 546 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ZNF229Q9UJW7 825 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 MKL2Q9ULH7 1088 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ATXN7L1Q9ULK2 861 aaPredicted RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 CMAHPQ9Y471 501 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 SIRT4Q9Y6E7 314 aaPredicted RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 SHISA3A0PJX4 238 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 OR6C70A6NIJ9 312 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 GNB5O14775 395 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 OGG1O15527 345 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 NPIPB7O75200 414 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 RGS9O75916 674 aaPredicted RBP8.94□□□□□ -0.98
USP39-214ENST00000474572 TIAF1O95411 115 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 CD14P08571 375 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 PGCP20142 388 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 ABCD3P28288 659 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 HOXD12P35452 270 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 GRK6P43250 576 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 MTNR1BP49286 362 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 DIO1P49895 249 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 HSF2Q03933 536 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 LGALS3BPQ08380 585 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 ZNF79Q15937 498 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 HLA-BQ31612 363 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 GLYR1Q49A26 553 aaPredicted RBP8.94□□□□□ -0.98
USP39-214ENST00000474572 CDONQ4KMG0 1287 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 NKAIN1Q4KMZ8 207 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 EMC4Q5J8M3 183 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 LINC01590Q5TEZ4 76 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 FCRLBQ6BAA4 426 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 DMKNQ6E0U4 476 aaPredicted RBP8.94□□□□□ -0.98
USP39-214ENST00000474572 OVCH1Q7RTY7 1134 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 SLC22A16Q86VW1 577 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 EGFL6Q8IUX8 553 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 MISPQ8IVT2 679 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 LAX1Q8IWV1 398 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 PRR22Q8IZ63 422 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 SLC38A9Q8NBW4 561 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 APCDD1LQ8NCL9 501 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 FAM83FQ8NEG4 500 aaPredicted RBP8.94□□□□□ -0.98
USP39-214ENST00000474572 OR4K13Q8NH42 304 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 OR5W2Q8NH69 310 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 MOSPD2Q8NHP6 518 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 NUBPLQ8TB37 319 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 AP3S1Q92572 193 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 TMEM203Q969S6 136 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 OTULINQ96BN8 352 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 CLIP3Q96DZ5 547 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 PGLYRP3Q96LB9 341 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 CEP19Q96LK0 163 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 GAL3ST4Q96RP7 486 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 NRSN2Q9GZP1 204 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 SRRQ9GZT4 340 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 SLC26A1Q9H2B4 701 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 FKRPQ9H9S5 495 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 ST6GALNAC2Q9UJ37 374 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 CACNA1EQ15878 2313 aa8.94□□□□□ -0.98
USP39-214ENST00000474572 RP1P56715 2156 aa8.93□□□□□ -0.98
USP39-214ENST00000474572 A0A1W2PQL4 384 aaPredicted RBP8.93□□□□□ -0.98
USP39-214ENST00000474572 OR6C68A6NDL8 312 aa8.93□□□□□ -0.98
USP39-214ENST00000474572 SEC14L5O43304 696 aa8.93□□□□□ -0.98
USP39-214ENST00000474572 GLCEO94923 617 aa8.93□□□□□ -0.98
USP39-214ENST00000474572 PDGFBP01127 241 aaPredicted RBP8.93□□□□□ -0.98
USP39-214ENST00000474572 BGLAPP02818 100 aa8.93□□□□□ -0.98
USP39-214ENST00000474572 MRPL3P09001 348 aaKnown RBP8.93□□□□□ -0.98
USP39-214ENST00000474572 FGF5P12034 268 aa8.93□□□□□ -0.98
USP39-214ENST00000474572 SPI1P17947 270 aa8.93□□□□□ -0.98
USP39-214ENST00000474572 GTF2E2P29084 291 aaKnown RBP8.93□□□□□ -0.98
USP39-214ENST00000474572 TACR3P29371 465 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms