RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CASP12Q6UXS9 341 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 MIER2Q8N344 545 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 NEUROG1Q92886 237 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 SLC6A13Q9NSD5 602 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 UPB1Q9UBR1 384 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 PLCE1Q9P212 2302 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 DSPPQ9NZW4 1301 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 A0A0G2JPF8 293 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 HNRNPCL2B2RXH8 293 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 SHISA9B4DS77 424 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 HNRNPCL3B7ZW38 293 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 HNRNPCL1O60812 293 aaKnown RBP17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 RAMP1O60894 148 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 BCHEP06276 602 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 THBS1P07996 1170 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 TFPTP0C1Z6 253 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 HNRNPCL4P0DMR1 293 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 IMPDH2P12268 514 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 PTAFRP25105 342 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 PPP2R2BQ00005 443 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 TGFBR3Q03167 851 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 VEZF1Q14119 521 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 SLC17A1Q14916 467 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 MAPK11Q15759 364 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 PGGHGQ32M88 737 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 C6orf10Q5SRN2 563 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 RNF220Q5VTB9 566 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 WBP2NLQ6ICG8 309 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 SLC38A5Q8WUX1 472 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 MUS81Q96NY9 551 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 RAD21L1Q9H4I0 556 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 PIF1Q9H611 641 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 BARX1Q9HBU1 254 aaPredicted RBP17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 RLIMQ9NVW2 624 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 NPAP1Q9NZP6 1156 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 DCTN4Q9UJW0 460 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 ZNF443Q9Y2A4 671 aaPredicted RBP17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 FLVCR1Q9Y5Y0 555 aa17.93■□□□□ 0.46
PDLIM4-206ENST00000474421 HEATR1Q9H583 2144 aaKnown RBP17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 FAM234BA2RU67 622 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 NTF4P34130 210 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 TNK1Q13470 666 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 OTUD3Q5T2D3 398 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 AGAP6Q5VW22 663 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 ZNF836Q6ZNA1 936 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 MAVSQ7Z434 540 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 DTX2Q86UW9 622 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 VRK2Q86Y07 508 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 DEPDC4Q8N2C3 294 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 C17orf78Q8N4C9 275 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 C1orf162Q8NEQ5 155 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 OR52N5Q8NH56 324 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 TMEM45BQ96B21 275 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 OR52B2Q96RD2 323 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 TRAF4Q9BUZ4 470 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 SF3B5Q9BWJ5 86 aaKnown RBP17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 IFT52Q9Y366 437 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 SLC25A15Q9Y619 301 aa17.92■□□□□ 0.46
PDLIM4-206ENST00000474421 A0A096LPI6 279 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 ZC3H12DA2A288 527 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 LIPT2A6NK58 231 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 GKN3PP0CG01 181 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 CDKN1AP38936 164 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 ACAA2P42765 397 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 STX1BP61266 288 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 CEACAM7Q14002 265 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 GABRA6Q16445 453 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 BEND6Q5SZJ8 279 aaPredicted RBP17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 PRAMEF8Q5VWM4 474 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 PRAMEF7Q5VXH5 474 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 CADM2Q8N3J6 435 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 TMEM19Q96HH6 336 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 HS6ST2Q96MM7 605 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 SPATA9Q9BWV2 254 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 TAPBPLQ9BX59 468 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 USH1CQ9Y6N9 552 aa17.91■□□□□ 0.46
PDLIM4-206ENST00000474421 JMJD1CQ15652 2540 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 A8MVM7 634 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 PDLIM1O00151 329 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 ITGA5P08648 1049 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 NCF2P19878 526 aaPredicted RBP17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 CD40P25942 277 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 ZNF83P51522 516 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 FADDQ13158 208 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 OR7A5Q15622 319 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 SLC22A25Q6T423 547 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 EPGNQ6UW88 154 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 POMGNT2Q8NAT1 580 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 OR52E4Q8NGH9 312 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 OR9I1Q8NGQ6 314 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 SLC35B4Q969S0 331 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 VPS33AQ96AX1 596 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 AMBRA1Q9C0C7 1298 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 SLCO5A1Q9H2Y9 848 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 POU2F3Q9UKI9 436 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 AMDHD2Q9Y303 409 aa17.9■□□□□ 0.46
PDLIM4-206ENST00000474421 AQP7P3A6NL99 342 aa17.89■□□□□ 0.45
PDLIM4-206ENST00000474421 AKR7A3O95154 331 aa17.89■□□□□ 0.45
PDLIM4-206ENST00000474421 VAMP5O95183 116 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms