RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SWT1Q5T5J6 900 aaKnown RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 C5orf46Q6UWT4 87 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 C6orf89Q6UWU4 347 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 MAMDC2Q7Z304 686 aaPredicted RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 LSRQ86X29 649 aaPredicted RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 LIX1LQ8IVB5 337 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 RNF128Q8TEB7 428 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 ABHD3Q8WU67 409 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 GEMIN6Q8WXD5 167 aaKnown RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 GMPPAQ96IJ6 420 aaPredicted RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 NSMCE2Q96MF7 247 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 DOCK7Q96N67 2140 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 PSMG3-AS1Q96PY0 264 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 NAA11Q9BSU3 229 aaPredicted RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 THTPAQ9BU02 230 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 PCDHAC1Q9H158 963 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 GORASP2Q9H8Y8 452 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 GLRX2Q9NS18 164 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 DCAF13Q9NV06 445 aaKnown RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 SLC7A7Q9UM01 511 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 CLEC4AQ9UMR7 237 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 EMC9Q9Y3B6 208 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 PCNX1Q96RV3 2341 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 LRRK2Q5S007 2527 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 SMAD9O15198 467 aaKnown RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 EIF1BO60739 113 aaKnown RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 SMNDC1O75940 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX56-209ENST00000473924 PDE5AO76074 875 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 STAMBPO95630 424 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 CLDN1O95832 211 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 PTNP21246 168 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 RPS5P46782 204 aaKnown RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 RASSF2P50749 326 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 RASGEF1BQ0VAM2 473 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 TMEM201Q5SNT2 666 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 TTC33Q6PID6 262 aaPredicted RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 FAM214BQ7L5A3 538 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 P3H2Q8IVL5 708 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 SLC25A36Q96CQ1 311 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 LRRC46Q96FV0 321 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 SLC41A3Q96GZ6 507 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 EPYCQ99645 322 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 BTBD10Q9BSF8 475 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 POLR2J2Q9GZM3 115 aaKnown RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 POLR2J3Q9H1A7 115 aaKnown RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 PIGMQ9H3S5 423 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 C6orf203Q9P0P8 240 aaPredicted RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 KLHL9Q9P2J3 617 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 PLEKHB1Q9UF11 243 aaPredicted RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 KLF2Q9Y5W3 355 aaPredicted RBP11.09□□□□□ -0.63
DDX56-209ENST00000473924 V9GYQ6 96 aa11.09□□□□□ -0.63
DDX56-209ENST00000473924 MED12LQ86YW9 2145 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 DOPEY1Q5JWR5 2465 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 LIPT2A6NK58 231 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 OR2T1O43869 369 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 CYTIPO60759 359 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 SS18L1O75177 396 aaPredicted RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 NPIPB7O75200 414 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 TNFSF13O75888 250 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 ATP5HO75947 161 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 OR5F1O95221 314 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 KIR2DL2P43627 348 aaPredicted RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 YAP1P46937 504 aaKnown RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 ASCL1P50553 236 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 EGR4Q05215 589 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 BNIP1Q12981 228 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 PIN1Q13526 163 aaPredicted RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 FXNQ16595 210 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 OTUD3Q5T2D3 398 aaPredicted RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 VWA1Q6PCB0 445 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 GDF7Q7Z4P5 450 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 LUZP2Q86TE4 346 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 CYP4Z1Q86W10 505 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 C10orf53Q8N6V4 93 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 RELL2Q8NC24 303 aaPredicted RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 MFSD8Q8NHS3 518 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 PIGXQ8TBF5 258 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 CCDC124Q96CT7 223 aaKnown RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 KTI12Q96EK9 354 aaPredicted RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 PRRC1Q96M27 445 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 TACO1Q9BSH4 297 aaKnown RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 TMEM43Q9BTV4 400 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 AMBRA1Q9C0C7 1298 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 CHST11Q9NPF2 352 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 ACTR3BQ9P1U1 418 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 RIMS3Q9UJD0 308 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 PROCRQ9UNN8 238 aa11.08□□□□□ -0.64
DDX56-209ENST00000473924 FAM32AQ9Y421 112 aaKnown RBP11.08□□□□□ -0.64
DDX56-209ENST00000473924 IGKV1D-42A0A075B6H8 117 aa11.07□□□□□ -0.64
DDX56-209ENST00000473924 TRAV36DV7A0A075B6V5 113 aa11.07□□□□□ -0.64
DDX56-209ENST00000473924 AKR7A3O95154 331 aa11.07□□□□□ -0.64
DDX56-209ENST00000473924 THY1P04216 161 aa11.07□□□□□ -0.64
DDX56-209ENST00000473924 YES1P07947 543 aa11.07□□□□□ -0.64
DDX56-209ENST00000473924 THRBP10828 461 aa11.07□□□□□ -0.64
DDX56-209ENST00000473924 KLK2P20151 261 aa11.07□□□□□ -0.64
DDX56-209ENST00000473924 CBLP22681 906 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms