RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 MED20Q9H944 212 aa5.65□□□□□ -1.51
HERC4-209ENST00000473533 SLC23A2Q9UGH3 650 aa5.65□□□□□ -1.51
HERC4-209ENST00000473533 ING1Q9UK53 422 aaPredicted RBP5.65□□□□□ -1.51
HERC4-209ENST00000473533 ABT1Q9ULW3 272 aaKnown RBP5.65□□□□□ -1.51
HERC4-209ENST00000473533 TMEM14AQ9Y6G1 99 aa5.65□□□□□ -1.51
HERC4-209ENST00000473533 DENND4AQ7Z401 1863 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 CKAP5Q14008 2032 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 BLACEA4D250 179 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 TEX46H3BTG2 121 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SULT1C2O00338 296 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 ARPC3O15145 178 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 FCMRO60667 390 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 IGF2P01344 180 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 RAB3AP20336 220 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 DRD5P21918 477 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SKP1P63208 163 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SGCGQ13326 291 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 KIR2DS3Q14952 304 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 DUSP5Q16690 384 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 RNASE12Q5GAN4 147 aaKnown RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 SFRP4Q6FHJ7 346 aaPredicted RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 RGS7BPQ6MZT1 257 aaPredicted RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 TMUB2Q71RG4 321 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 GLB1L2Q8IW92 636 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 AMER3Q8N944 861 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 C17orf47Q8NEP4 570 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 OR7G2Q8NG99 324 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 OR5J2Q8NH18 312 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 ST8SIA4Q92187 359 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 RSC1A1Q92681 617 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 PELI1Q96FA3 418 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 TIMP4Q99727 224 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SEMA4CQ9C0C4 833 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 ALX4Q9H161 411 aaPredicted RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 SLCO5A1Q9H2Y9 848 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SLC6A20Q9NP91 592 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 IL20RAQ9UHF4 553 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 ZNF107Q9UII5 783 aaPredicted RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 CLEC4AQ9UMR7 237 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 AK6Q9Y3D8 172 aaKnown RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 GON4LQ3T8J9 2241 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 A0A0B4J2E0 115 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 A0A1B0GX12 115 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 OR2M5A3KFT3 312 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 ANXA2P2A6NMY6 339 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 A8MXK9 166 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 E9PI62 339 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 IMPA2O14732 288 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 PRICKLE3O43900 615 aaPredicted RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 PCDH8O95206 1070 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 THY1P04216 161 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 ANXA2P07355 339 aaKnown RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 AKAIN1P0CW23 69 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 APEHP13798 732 aaKnown RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 ZNF250P15622 560 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 RPA2P15927 270 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 RORAP35398 523 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 P2RY2P41231 377 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SOX9P48436 509 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 CENPAP49450 140 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 MAZP56270 477 aaKnown RBP5.64□□□□□ -1.51
HERC4-209ENST00000473533 ZP1P60852 638 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 PDGFRLQ15198 375 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 Q499Y3 187 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 TP53I3Q53FA7 332 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 CLVS2Q5SYC1 327 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 PXDC1Q5TGL8 231 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 LIN54Q6MZP7 749 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 HMGN2P46Q86SG4 172 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 OR52I2Q8NH67 350 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SYNPRQ8TBG9 265 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 THEM6Q8WUY1 208 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 POF1BQ8WVV4 589 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 COL26A1Q96A83 441 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 TCEAL4Q96EI5 215 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 POTEKPQ9BYX7 375 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 CHIAQ9BZP6 476 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 SHARPINQ9H0F6 387 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 NCDNQ9UBB6 729 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 ICAM5Q9UMF0 924 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 FOXJ3Q9UPW0 622 aa5.64□□□□□ -1.51
HERC4-209ENST00000473533 IGLON5A6NGN9 336 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 EFCAB7A8K855 629 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 NUDT19A8MXV4 375 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 D6RAR5 112 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 TOR1AO14656 332 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 BRINP1O60477 761 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 GALR3O60755 368 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 PRAMEF2O60811 474 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 GLCEO94923 617 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 RPL4P36578 427 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 CCR2P41597 374 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SELENOPP49908 381 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SLC25A1P53007 311 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 NTHL1P78549 312 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 FLI1Q01543 452 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 RASGEF1BQ0VAM2 473 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 EIF2B5Q13144 721 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 UBXN2BQ14CS0 331 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 FAM27D1Q5T7N8 215 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms