RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 RIN1Q13671 783 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 EFNB3Q15768 340 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 TBRG1Q3YBR2 411 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 AP1ARQ63HQ0 302 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 OR4F3Q6IEY1 312 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 DEF8Q6ZN54 512 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 FRRS1Q6ZNA5 592 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 TRMT10CQ7L0Y3 403 aaKnown RBP10.93□□□□□ -0.66
TRAF4-209ENST00000473421 GRINAQ7Z429 371 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 GSPT2Q8IYD1 628 aaKnown RBP10.93□□□□□ -0.66
TRAF4-209ENST00000473421 C4orf33Q8N1A6 199 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 SVOPLQ8N434 492 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 LINC01356Q8N9X3 169 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 CCDC63Q8NA47 563 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 BCL2L2Q92843 193 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-209ENST00000473421 ZHX1-C8orf76Q96EF9 292 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 SLC38A2Q96QD8 506 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 DOK1Q99704 481 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 DUSP26Q9BV47 211 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 MECRQ9BV79 373 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 METTL17Q9H7H0 456 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-209ENST00000473421 TRAPPC4Q9Y296 219 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 TMED7Q9Y3B3 224 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 RNF103-CHMP3A0A140T963 221 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 B9A039 149 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 FGF4P08620 206 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 KRT16P08779 473 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 G6PDP11413 515 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 TACR3P29371 465 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 ALDH3A1P30838 453 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 SELENOPP49908 381 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 IDH3GP51553 393 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-209ENST00000473421 P2RY4P51582 365 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 PGS1Q32NB8 556 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 LSM12Q3MHD2 195 aaKnown RBP10.92□□□□□ -0.66
TRAF4-209ENST00000473421 CCDC153Q494R4 210 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 TNFAIP8L2Q6P589 184 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-209ENST00000473421 C1orf229Q6ZS94 237 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-209ENST00000473421 ZCCHC23Q6ZST2 131 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 AAED1Q7RTV5 226 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 CDK20Q8IZL9 346 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 OR9K2Q8NGE7 335 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 OR1K1Q8NGR3 316 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 XAGE5Q8WWM1 108 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 ARL8AQ96BM9 186 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 BOD1Q96IK1 185 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 SAP130Q9H0E3 1048 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 SLC9A8Q9Y2E8 581 aa10.92□□□□□ -0.66
TRAF4-209ENST00000473421 SMIM23A6NLE4 172 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 FAM157AC9JC47 383 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 hCG_2039718K7EN88 272 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 DNPH1O43598 174 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 SCN2BO60939 215 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 UPK3AO75631 287 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 WNT11O96014 354 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 IGLV1-44P01699 117 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 PPOXP50336 477 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 CHN2P52757 468 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 NAA20P61599 178 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 SLC35A1P78382 337 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 KCNJ10P78508 379 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 BNIP2Q12982 314 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 CEACAM7Q14002 265 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 OTUD3Q5T2D3 398 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-209ENST00000473421 THSD4Q6ZMP0 1018 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 C16orf62Q7Z3J2 963 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 ANKRD46Q86W74 232 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 TMEM45BQ96B21 275 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 ROPN1LQ96C74 230 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 ZNF837Q96EG3 531 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-209ENST00000473421 SLC35G5Q96KT7 338 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 ALKBH3Q96Q83 286 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-209ENST00000473421 KATNB1Q9BVA0 655 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 TPK1Q9H3S4 243 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 NARFLQ9H6Q4 476 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 LPAR2Q9HBW0 351 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 MYOZ1Q9NP98 299 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-209ENST00000473421 PARPBPQ9NWS1 579 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 SLC17A7Q9P2U7 560 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 CRNNQ9UBG3 495 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-209ENST00000473421 WDR45Q9Y484 360 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 TGP01266 2768 aa10.91□□□□□ -0.66
TRAF4-209ENST00000473421 LIPT2A6NK58 231 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 TMEM114B3SHH9 223 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 ANKRD28O15084 1053 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 TRIM13O60858 407 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 AVPP01185 164 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 CRYAAP02489 173 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 ADRA2AP08913 450 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 KRT4P19013 534 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 PRPS1L1P21108 318 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 CLK1P49759 484 aaKnown RBP10.9□□□□□ -0.66
TRAF4-209ENST00000473421 TGFBR3Q03167 851 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 OR7A5Q15622 319 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 ADRM1Q16186 407 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 WHAMMP3Q1A5X7 153 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 PAQR6Q6TCH4 344 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 EPHX4Q8IUS5 362 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 ZNF786Q8N393 782 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 ARFGAP2Q8N6H7 521 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms