RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SCP2D1Q9UJQ7 156 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 PILRAQ9UKJ1 303 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 HEATR5AQ86XA9 2040 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 A0A087WV48 116 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 OGG1O15527 345 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 GMDSO60547 372 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 FMO6PO60774 539 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 ARL6IP5O75915 188 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 KIR2DL1P43626 348 aaPredicted RBP19.42■□□□□ 0.7
COL18A1-207ENST00000473212 RPS11P62280 158 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL18A1-207ENST00000473212 GPM6BQ13491 265 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 FHL1Q13642 323 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 FAM53BQ14153 422 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 NDUFAF6Q330K2 333 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 FIGLAQ6QHK4 219 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 RTL4Q6ZR62 310 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 UBE2Q1Q7Z7E8 422 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 COMMD7Q86VX2 200 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 CMIPQ8IY22 773 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 CMTM4Q8IZR5 234 aa19.42■□□□□ 0.7
COL18A1-207ENST00000473212 METTL17Q9H7H0 456 aaPredicted RBP19.42■□□□□ 0.7
COL18A1-207ENST00000473212 CEP290O15078 2479 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 RPS10-NUDT3A0A1W2PQS6 291 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 OR2W5A6NFC9 320 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 B8ZZF3 427 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 C5orf67F2Z3F1 127 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 GSTZ1O43708 216 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-207ENST00000473212 RASGRP1O95267 797 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 UCHL1P09936 223 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 GBX2P52951 348 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-207ENST00000473212 POU4F2Q12837 409 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 LINGO2Q7L985 606 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 FAM98AQ8NCA5 519 aaKnown RBP19.41■□□□□ 0.7
COL18A1-207ENST00000473212 ZNF559Q9BR84 538 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 GNG8Q9UK08 70 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 SATB2Q9UPW6 733 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 PCDHGA9Q9Y5G4 932 aaKnown RBP19.41■□□□□ 0.7
COL18A1-207ENST00000473212 TRBV2A0A0J9YWF9 115 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 A0A1B0GWA3 101 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 H0YGG7 62 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 PSMD9O00233 223 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 CFDP00746 253 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-207ENST00000473212 IFNA7P01567 189 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 ARF3P61204 181 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-207ENST00000473212 SIRPAP78324 504 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 IKZF1Q13422 519 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 DYRK1AQ13627 763 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 GPR18Q14330 331 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 TMEM255AQ5JRV8 349 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 NLRC3Q7RTR2 1065 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 YAF2Q8IY57 180 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 PIGKQ92643 395 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 RBP7Q96R05 134 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 ZNF436Q9C0F3 470 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-207ENST00000473212 ACTR6Q9GZN1 396 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 DUSP22Q9NRW4 184 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 RCE1Q9Y256 329 aa19.41■□□□□ 0.7
COL18A1-207ENST00000473212 C4orf47A7E2U8 309 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 HRKO00198 91 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 IFNGP01579 166 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 HIST1H1CP16403 213 aaKnown RBP19.4■□□□□ 0.7
COL18A1-207ENST00000473212 SLC6A6P31641 620 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 PSMB10P40306 273 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 CAPZA2P47755 286 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 MGAT2Q10469 447 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 NNATQ16517 81 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 ARHGAP11AQ6P4F7 1023 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 ZNF613Q6PF04 617 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.4■□□□□ 0.7
COL18A1-207ENST00000473212 CDRT4Q8N9R6 151 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 SNX33Q8WV41 574 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 UBQLN2Q9UHD9 624 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 ADAM18Q9Y3Q7 739 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 CACNA1CQ13936 2221 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 A0A0B4J2E0 115 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 A0A1B0GX12 115 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 G3V3Q6 166 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 PRKNO60260 465 aaPredicted RBP19.4■□□□□ 0.7
COL18A1-207ENST00000473212 PEX14O75381 377 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 EDNRAP25101 427 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 PUDPQ08623 228 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 PRICKLE4Q2TBC4 344 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 UBE2NLQ5JXB2 153 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 HES5Q5TA89 166 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 BAIAP2L2Q6UXY1 529 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 Q6ZTK2 550 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 OR11G2Q8NGC1 345 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 MYADMQ96S97 322 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 NRIP3Q9NQ35 241 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 BAIAP2Q9UQB8 552 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 MPDZO75970 2070 aa19.4■□□□□ 0.7
COL18A1-207ENST00000473212 ATG2AQ2TAZ0 1938 aa19.39■□□□□ 0.7
COL18A1-207ENST00000473212 TEX51A0A1B0GUA7 166 aa19.39■□□□□ 0.69
COL18A1-207ENST00000473212 IDSB3KWA1 339 aa19.39■□□□□ 0.69
COL18A1-207ENST00000473212 IGKV1D-16P01601 117 aa19.39■□□□□ 0.69
COL18A1-207ENST00000473212 DEFB110Q30KQ9 67 aa19.39■□□□□ 0.69
COL18A1-207ENST00000473212 EXOSC6Q5RKV6 272 aaKnown RBP19.39■□□□□ 0.69
COL18A1-207ENST00000473212 OVCH1Q7RTY7 1134 aa19.39■□□□□ 0.69
COL18A1-207ENST00000473212 GLRX5Q86SX6 157 aa19.39■□□□□ 0.69
COL18A1-207ENST00000473212 ZPLD1Q8TCW7 415 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms