RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 NSMCE2Q96MF7 247 aa18.58■□□□□ 0.56
TOP3A-204ENST00000472959 MUC13Q9H3R2 512 aa18.58■□□□□ 0.56
TOP3A-204ENST00000472959 LIPT2A6NK58 231 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 ARPC2O15144 300 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 ATP5HO75947 161 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 PRKD3O94806 890 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 OR5F1O95221 314 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 AHSA1O95433 338 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 THRBP10828 461 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 IMPDH2P12268 514 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 BMP5P22003 454 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 GUSBP1Q15486 140 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 FAM214BQ7L5A3 538 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 MAMDC2Q7Z304 686 aaPredicted RBP18.57■□□□□ 0.56
TOP3A-204ENST00000472959 MPP4Q96JB8 637 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 EPYCQ99645 322 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 BTBD10Q9BSF8 475 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 TACO1Q9BSH4 297 aaKnown RBP18.57■□□□□ 0.56
TOP3A-204ENST00000472959 TMEM43Q9BTV4 400 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 TAPBPLQ9BX59 468 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 PIGMQ9H3S5 423 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 ACTR3BQ9P1U1 418 aa18.57■□□□□ 0.56
TOP3A-204ENST00000472959 FAM90A27PA6NNH2 459 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 SMAD9O15198 467 aaKnown RBP18.56■□□□□ 0.56
TOP3A-204ENST00000472959 OR2T1O43869 369 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 CYTIPO60759 359 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 SS18L1O75177 396 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-204ENST00000472959 TNFSF13O75888 250 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 CLDN1O95832 211 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 FPR1P21462 350 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 IFNA8P32881 189 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 KIR2DL2P43627 348 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-204ENST00000472959 RASSF2P50749 326 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 TAS2R41P59536 307 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 H3F3AP84243 136 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 EGR4Q05215 589 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 LINC00114Q6XXX2 140 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 TSPYL5Q86VY4 417 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-204ENST00000472959 MFSD8Q8NHS3 518 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 SLC7A6OSQ96CW6 309 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-204ENST00000472959 SLC41A3Q96GZ6 507 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 NAA11Q9BSU3 229 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-204ENST00000472959 THTPAQ9BU02 230 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 KLHL9Q9P2J3 617 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 EMC9Q9Y3B6 208 aa18.56■□□□□ 0.56
TOP3A-204ENST00000472959 IGKV1D-42A0A075B6H8 117 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 TRAV36DV7A0A075B6V5 113 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 IGHV3-15A0A0B4J1V0 119 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 LYPD3O95274 346 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 THY1P04216 161 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 CTBP2P56545 445 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 TRIM25Q14258 630 aaKnown RBP18.55■□□□□ 0.56
TOP3A-204ENST00000472959 PDK3Q15120 406 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 OR7A5Q15622 319 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 PAQR6Q6TCH4 344 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 GDF7Q7Z4P5 450 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 CNEP1R1Q8N9A8 125 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 OR6S1Q8NH40 331 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 PIGXQ8TBF5 258 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 ABHD3Q8WU67 409 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 DNAJA3Q96EY1 480 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 PRRC1Q96M27 445 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 UCK2Q9BZX2 261 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 AMBRA1Q9C0C7 1298 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 RIMS3Q9UJD0 308 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 SLC7A7Q9UM01 511 aa18.55■□□□□ 0.56
TOP3A-204ENST00000472959 SPTBN1Q01082 2364 aaKnown RBP18.54■□□□□ 0.56
TOP3A-204ENST00000472959 ARHGAP21Q5T5U3 1957 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 A1L4Q6 167 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 RASGEF1BQ0VAM2 473 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 PIN1Q13526 163 aaPredicted RBP18.54■□□□□ 0.56
TOP3A-204ENST00000472959 MTX3Q5HYI7 312 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 FAM69AQ5T7M9 428 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 RELL2Q8NC24 303 aaPredicted RBP18.54■□□□□ 0.56
TOP3A-204ENST00000472959 POP5Q969H6 163 aaKnown RBP18.54■□□□□ 0.56
TOP3A-204ENST00000472959 STARD4Q96DR4 205 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 KTI12Q96EK9 354 aaPredicted RBP18.54■□□□□ 0.56
TOP3A-204ENST00000472959 LRRC46Q96FV0 321 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 PYURFQ96I23 114 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 PTDSS2Q9BVG9 487 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 SLC19A3Q9BZV2 496 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 BCO1Q9HAY6 547 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 CHST11Q9NPF2 352 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 JKAMPQ9P055 326 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 KLHL13Q9P2N7 655 aa18.54■□□□□ 0.56
TOP3A-204ENST00000472959 ASH1LQ9NR48 2969 aaKnown RBP18.54■□□□□ 0.56
TOP3A-204ENST00000472959 KIAA1549Q9HCM3 1950 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 USP9YO00507 2555 aaPredicted RBP18.53■□□□□ 0.56
TOP3A-204ENST00000472959 NKX2-6A6NCS4 301 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 FTCDNL1E5RQL4 147 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 FZD7O75084 574 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 DNAJC8O75937 253 aaPredicted RBP18.53■□□□□ 0.56
TOP3A-204ENST00000472959 PDE5AO76074 875 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 YES1P07947 543 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 RPS5P46782 204 aaKnown RBP18.53■□□□□ 0.56
TOP3A-204ENST00000472959 ASCL1P50553 236 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 SIRPAP78324 504 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 CBX1P83916 185 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 ST3GAL3Q11203 375 aa18.53■□□□□ 0.56
TOP3A-204ENST00000472959 MFSD13AQ14CX5 517 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms