RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ANKRD42Q8N9B4 389 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 OR52E4Q8NGH9 312 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 DHRS9Q9BPW9 319 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 CBLN4Q9NTU7 201 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 CADP27708 2225 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 TRPC5OSA6NMA1 111 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 E7EQL1 145 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 HDAC3O15379 428 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 TLX2O43763 284 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-210ENST00000472880 CD5LO43866 347 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 KRT75O95678 551 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 FOXG1P55316 489 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-210ENST00000472880 EPS8Q12929 822 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 PAQR6Q6TCH4 344 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 MUC15Q8N387 334 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 C17orf78Q8N4C9 275 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 GLB1L3Q8NCI6 653 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-210ENST00000472880 C1orf162Q8NEQ5 155 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-210ENST00000472880 MUS81Q96NY9 551 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 RHNO1Q9BSD3 238 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 WDR55Q9H6Y2 383 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-210ENST00000472880 P2RX2Q9UBL9 471 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 DCTN4Q9UJW0 460 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 AMDHD2Q9Y303 409 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 GPR45Q9Y5Y3 372 aa17.36■□□□□ 0.37
COL9A3-210ENST00000472880 CHD3Q12873 2000 aaKnown RBP17.36■□□□□ 0.37
COL9A3-210ENST00000472880 ZC3H12DA2A288 527 aaKnown RBP17.35■□□□□ 0.37
COL9A3-210ENST00000472880 RFXANKO14593 260 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 CXCR1P25024 350 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 EPHA3P29320 983 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 FABP6P51161 128 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 IRX1P78414 480 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-210ENST00000472880 TGFBR3Q03167 851 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 SLC17A1Q14916 467 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 OTUD3Q5T2D3 398 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-210ENST00000472880 C11orf71Q6IPW1 123 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 B3GLCTQ6Y288 498 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 LSRQ86X29 649 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-210ENST00000472880 C1QTNF6Q9BXI9 259 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 AMBRA1Q9C0C7 1298 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 TMBIM4Q9HC24 238 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 YAE1D1Q9NRH1 226 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 SLC7A10Q9NS82 523 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 CALML5Q9NZT1 146 aa17.35■□□□□ 0.37
COL9A3-210ENST00000472880 TMEM120BA0PK00 339 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 PDLIM1O00151 329 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 GPIP06744 558 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 KITP10721 976 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 MAGOHP61326 146 aaKnown RBP17.34■□□□□ 0.37
COL9A3-210ENST00000472880 GSTA3Q16772 222 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 LIN52Q52LA3 116 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 TSPO2Q5TGU0 170 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 NXNQ6DKJ4 435 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 KLHL24Q6TFL4 600 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 CLEC2AQ6UVW9 174 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 TMEM45BQ96B21 275 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 TLCD1Q96CP7 247 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 FKRPQ9H9S5 495 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 SLC17A5Q9NRA2 495 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 THAP1Q9NVV9 213 aa17.34■□□□□ 0.37
COL9A3-210ENST00000472880 IGHV4-30-2A0A087WSY4 118 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 ANP32DO95626 131 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 IL6P05231 212 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 BCHEP06276 602 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 GKN3PP0CG01 181 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 IDO1P14902 403 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 CRISP3P54108 245 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 DSCR9P59020 149 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 CEACAM7Q14002 265 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 RAB35Q15286 201 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 OR7A5Q15622 319 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 PDCD4Q53EL6 469 aaKnown RBP17.33■□□□□ 0.36
COL9A3-210ENST00000472880 ZNF544Q6NX49 715 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 ZNF836Q6ZNA1 936 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 CXXC5Q7LFL8 322 aaKnown RBP17.33■□□□□ 0.36
COL9A3-210ENST00000472880 CADM2Q8N3J6 435 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 WDR31Q8NA23 367 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 OR52P1PQ8NH57 321 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 MGARPQ8TDB4 240 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 SF3B5Q9BWJ5 86 aaKnown RBP17.33■□□□□ 0.36
COL9A3-210ENST00000472880 ADAM19Q9H013 955 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 CACYBPQ9HB71 228 aaKnown RBP17.33■□□□□ 0.36
COL9A3-210ENST00000472880 RLIMQ9NVW2 624 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 ATP23Q9Y6H3 246 aa17.33■□□□□ 0.36
COL9A3-210ENST00000472880 DSPPQ9NZW4 1301 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 CDHR4A6H8M9 788 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 LIPT2A6NK58 231 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 SLCO1B7G3V0H7 640 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 SLC22A3O75751 556 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 AKR7A3O95154 331 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 ETFAP13804 333 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 MPGP29372 298 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 CRATP43155 626 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 SLC18A1P54219 525 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 WDR4P57081 412 aaKnown RBP17.32■□□□□ 0.36
COL9A3-210ENST00000472880 COPZ1P61923 177 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 C1QTNF12Q5T7M4 302 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 WBP2NLQ6ICG8 309 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 AAED1Q7RTV5 226 aa17.32■□□□□ 0.36
COL9A3-210ENST00000472880 GPAT4Q86UL3 456 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms