RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 CASP12Q6UXS9 341 aa17.22■□□□□ 0.35
COMMD1-208ENST00000472729 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.22■□□□□ 0.35
COMMD1-208ENST00000472729 SERPINA11Q86U17 422 aa17.22■□□□□ 0.35
COMMD1-208ENST00000472729 GPAT4Q86UL3 456 aa17.22■□□□□ 0.35
COMMD1-208ENST00000472729 P2RY8Q86VZ1 359 aa17.22■□□□□ 0.35
COMMD1-208ENST00000472729 BHLHE22Q8NFJ8 381 aaPredicted RBP17.22■□□□□ 0.35
COMMD1-208ENST00000472729 ELOA3Q8NG57 546 aa17.22■□□□□ 0.35
COMMD1-208ENST00000472729 HS3ST6Q96QI5 342 aa17.22■□□□□ 0.35
COMMD1-208ENST00000472729 ADPRHL2Q9NX46 363 aa17.22■□□□□ 0.35
COMMD1-208ENST00000472729 A0A1W2PPR1 153 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 KLF4O43474 513 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 KRT33AO76009 404 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 AHSA1O95433 338 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 VIMP08670 466 aaKnown RBP17.21■□□□□ 0.35
COMMD1-208ENST00000472729 ARAFP10398 606 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 PRG2P13727 222 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 SLC16A1P53985 500 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 NFYCQ13952 458 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 PPA1Q15181 289 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 TAB1Q15750 504 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 DHDDSQ86SQ9 333 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 TSPEARQ8WU66 669 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 PIP5K1AQ99755 562 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 RNF115Q9Y4L5 304 aa17.21■□□□□ 0.35
COMMD1-208ENST00000472729 PCNX3Q9H6A9 2034 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 ZC3H12DA2A288 527 aaKnown RBP17.2■□□□□ 0.34
COMMD1-208ENST00000472729 ZNF716A6NP11 495 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 IMPDH2P12268 514 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 GPX2P18283 190 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 ADSLP30566 484 aaPredicted RBP17.2■□□□□ 0.34
COMMD1-208ENST00000472729 HOXC12P31275 282 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 H3F3AP84243 136 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 TGFBR3Q03167 851 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 FAPQ12884 760 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 BNIP2Q12982 314 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 TIMM23BQ5SRD1 257 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 C1orf140Q5VVS0 124 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 SHEQ5VZ18 495 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 ARMC8Q8IUR7 673 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 MSRB3Q8IXL7 192 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 C11orf65Q8NCR3 313 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 HIPK4Q8NE63 616 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM171Q8WVE6 324 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 SF3B5Q9BWJ5 86 aaKnown RBP17.2■□□□□ 0.34
COMMD1-208ENST00000472729 TRIM2Q9C040 744 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM38AQ9H6F2 299 aa17.2■□□□□ 0.34
COMMD1-208ENST00000472729 LIPT2A6NK58 231 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 FRS3O43559 492 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 RAD51DO75771 328 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 AKR7A3O95154 331 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 VAMP5O95183 116 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 PNMTP11086 282 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 IGHV1-2P23083 117 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 AQP1P29972 269 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 HOXC5Q00444 222 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 MMEL1Q495T6 779 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 OR7E24Q6IFN5 339 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 ABHD12BQ7Z5M8 362 aaPredicted RBP17.19■□□□□ 0.34
COMMD1-208ENST00000472729 OR52E4Q8NGH9 312 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 STK35Q8TDR2 534 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 DNAJA4Q8WW22 397 aaPredicted RBP17.19■□□□□ 0.34
COMMD1-208ENST00000472729 AKAP1Q92667 903 aaKnown RBP eCLIP17.19■□□□□ 0.34
COMMD1-208ENST00000472729 SLC25A36Q96CQ1 311 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM120AQ9BXJ8 343 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 CXorf56Q9H5V9 222 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM27Q9HBJ8 222 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 SLC52A3Q9NQ40 469 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 TAS2R16Q9NYV7 291 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 GMEB1Q9Y692 573 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 MPDZO75970 2070 aa17.19■□□□□ 0.34
COMMD1-208ENST00000472729 HOXB9P17482 250 aaPredicted RBP17.18■□□□□ 0.34
COMMD1-208ENST00000472729 ARFIP2P53365 341 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 RGS8P57771 180 aaPredicted RBP17.18■□□□□ 0.34
COMMD1-208ENST00000472729 ADAM8P78325 824 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 RBBP4Q09028 425 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 CYLC2Q14093 348 aaPredicted RBP17.18■□□□□ 0.34
COMMD1-208ENST00000472729 SLC17A1Q14916 467 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 RUNDC3AQ59EK9 446 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 DHRS4L2Q6PKH6 230 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 KLHL17Q6TDP4 642 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 AAED1Q7RTV5 226 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 RANBP3LQ86VV4 465 aaPredicted RBP17.18■□□□□ 0.34
COMMD1-208ENST00000472729 SLC30A8Q8IWU4 369 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM99Q8N816 258 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 SLC26A7Q8TE54 656 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 C3orf49Q96BT1 292 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 CGREF1Q99674 301 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 SH3GL1Q99961 368 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 EVA1AQ9H8M9 152 aa17.18■□□□□ 0.34
COMMD1-208ENST00000472729 OR5H1A6NKK0 313 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 AQP7P3A6NL99 342 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 HS3ST1O14792 307 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 OR2T1O43869 369 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 IL1RL1Q01638 556 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 MAPRE2Q15555 327 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 ALG10BQ5I7T1 473 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 NCMAPQ5T1S8 102 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 ULK3Q6PHR2 472 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 C5orf46Q6UWT4 87 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 DLEU7Q6UYE1 221 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms