RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CALHM3Q86XJ0 350 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 POU5F2Q8N7G0 328 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 TMEM99Q8N816 258 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 OR52E4Q8NGH9 312 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 PIGXQ8TBF5 258 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 STK35Q8TDR2 534 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 ZC3HAV1LQ96H79 300 aaKnown RBP8.12□□□□□ -1.11
SYN3-211ENST00000472027 TAPBPLQ9BX59 468 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 HDHD5Q9BXW7 423 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 TRIM2Q9C040 744 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 OR10A4Q9H209 315 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 LIME1Q9H400 295 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 EVA1AQ9H8M9 152 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 C12orf10Q9HB07 376 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 TMEM27Q9HBJ8 222 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 PRSS50Q9UI38 385 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 SLC13A4Q9UKG4 626 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 ITGB1BP2Q9UKP3 347 aa8.12□□□□□ -1.11
SYN3-211ENST00000472027 NOSIPQ9Y314 301 aaKnown RBP8.12□□□□□ -1.11
SYN3-211ENST00000472027 INTS1Q8N201 2190 aaKnown RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 CELSR2Q9HCU4 2923 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ADGRG4Q8IZF6 3080 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 A0A1B0GWA3 101 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 GMNCA6NCL1 334 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ELOA3DA6NLF2 546 aaPredicted RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 TMEM229AB2RXF0 380 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 GPR171O14626 319 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 THBDP07204 575 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 C8BP07358 591 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 COX4I1P13073 169 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 PPP3CBP16298 524 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 DRD4P21917 467 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 DNAJA1P31689 397 aaKnown RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 LSP1P33241 339 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 PCGF2P35227 344 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 SLC16A1P53985 500 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 RGS8P57771 180 aaPredicted RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 NCALDP61601 193 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 EGR4Q05215 589 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ITGADQ13349 1161 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 SLC17A1Q14916 467 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 OR1Q1Q15612 314 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 TSC22D1Q15714 1073 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ELOA3BQ3SY89 546 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ALG10BQ5I7T1 473 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 OTUD3Q5T2D3 398 aaPredicted RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 INTS11Q5TA45 600 aaKnown RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 C1orf140Q5VVS0 124 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 TMEM225Q6GV28 225 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ULK3Q6PHR2 472 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 C6orf89Q6UWU4 347 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 Q6ZT83 130 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 CCDC80Q76M96 950 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 CPLX4Q7Z7G2 160 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ZNF100Q8IYN0 542 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 STEAP2Q8NFT2 490 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ELOA3Q8NG57 546 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 GPR32P1Q8NGA4 272 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 SLC26A7Q8TE54 656 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 DNAJA4Q8WW22 397 aaPredicted RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 RCN3Q96D15 328 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 SLC47A1Q96FL8 570 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ZNF583Q96ND8 569 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ARHGDIGQ99819 225 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ACTR6Q9GZN1 396 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 FAM107BQ9H098 131 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 PLEKHF2Q9H8W4 249 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 ADPRHL2Q9NX46 363 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 EMC3Q9P0I2 261 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 TESQ9UGI8 421 aaKnown RBP8.11□□□□□ -1.11
SYN3-211ENST00000472027 USP22Q9UPT9 525 aa8.11□□□□□ -1.11
SYN3-211ENST00000472027 CRYBG3Q68DQ2 2970 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 A0A087WUJ7 227 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 A0A1W2PPR1 153 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 AQP7P3A6NL99 342 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 ENO4A6NNW6 628 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 DEFB108AA8MXU0 73 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 FTCDNL1E5RQL4 147 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 M0R3H8 397 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 AIM2O14862 343 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 SIAH2O43255 324 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 SNX3O60493 162 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 MRPL33O75394 65 aaKnown RBP8.1□□□□□ -1.11
SYN3-211ENST00000472027 AHSA1O95433 338 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 CNOT4O95628 575 aaKnown RBP8.1□□□□□ -1.11
SYN3-211ENST00000472027 IGHV3-9P01782 118 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 PNMTP11086 282 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 CD247P20963 164 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 RPS5P46782 204 aaKnown RBP8.1□□□□□ -1.11
SYN3-211ENST00000472027 P2RY4P51582 365 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 CRYBA2P53672 197 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 CDH12P55289 794 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 GNGT1P63211 74 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 VEZF1Q14119 521 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 P2RY6Q15077 328 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 NRF1Q16656 503 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 FAM91A1Q658Y4 838 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 ERICH5Q6P6B1 374 aa8.1□□□□□ -1.11
SYN3-211ENST00000472027 RANBP3LQ86VV4 465 aaPredicted RBP8.1□□□□□ -1.11
SYN3-211ENST00000472027 TREML1Q86YW5 311 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms