RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 AQP7O14520 342 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 ATXN7O15265 892 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-207ENST00000471342 HCN1O60741 890 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 OR7A10O76100 309 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 PNMTP11086 282 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 FCGR1AP12314 374 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 PEPDP12955 493 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 CCNA2P20248 432 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 FPR3P25089 353 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 EIF1P41567 113 aaKnown RBP8.86□□□□□ -0.99
SF3A1-207ENST00000471342 HTR3AP46098 478 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 MASP1P48740 699 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 DBPQ10586 325 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-207ENST00000471342 GK3PQ14409 553 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 C3AR1Q16581 482 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 GXYLT1Q4G148 440 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 SOWAHCQ53LP3 525 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-207ENST00000471342 SYT14P1Q58G82 188 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 C1orf140Q5VVS0 124 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 POMZP3Q6PJE2 187 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 Q6ZPB1 254 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-207ENST00000471342 TMPPEQ6ZT21 453 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 CBR4Q8N4T8 237 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 ZIC4Q8N9L1 334 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 OR10G2Q8NGC3 310 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF563Q8TA94 476 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 FAR1Q8WVX9 515 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 TM9SF4Q92544 642 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 NR4A3Q92570 626 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 MIB2Q96AX9 1013 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 DNAJA3Q96EY1 480 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF845Q96IR2 970 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-207ENST00000471342 GPR137Q96N19 417 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 TNFRSF13CQ96RJ3 184 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 UCN2Q96RP3 112 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 TMEM185BQ9H7F4 350 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 PDP1Q9P0J1 537 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF407Q9C0G0 2248 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 KIAA1549Q9HCM3 1950 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 TRGV5A0A0B4J1U4 118 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 A0A1B0GTH9 108 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF716A6NP11 495 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 NPIPA5E9PKD4 350 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 EI24O14681 340 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 IMPA2O14732 288 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 SMAD9O15198 467 aaKnown RBP8.85□□□□□ -0.99
SF3A1-207ENST00000471342 TOXO94900 526 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 BAG2O95816 211 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 HLA-DOBP13765 273 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 ENPP1P22413 925 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 EDNRAP25101 427 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 PTDSS1P48651 473 aaKnown RBP8.85□□□□□ -0.99
SF3A1-207ENST00000471342 MAP2K6P52564 334 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 KLRB1Q12918 225 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 FOXD4Q12950 439 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-207ENST00000471342 TSPAN31Q12999 210 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 SELENBP1Q13228 472 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 DAG1Q14118 895 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 TMEM176BQ3YBM2 270 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-207ENST00000471342 FAM122BQ7Z309 247 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 SLC22A16Q86VW1 577 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 C10orf67Q8IYJ2 551 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 PARP8Q8N3A8 854 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 RPRMLQ8N4K4 120 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 AQP11Q8NBQ7 271 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 OR13C2Q8NGS9 318 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 OR4Q3Q8NH05 313 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 MOSPD2Q8NHP6 518 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 MFSD8Q8NHS3 518 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 GIPC3Q8TF64 312 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 TMEM234Q8WY98 164 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 BPIFA2Q96DR5 249 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 FAM46AQ96IP4 442 aaKnown RBP8.85□□□□□ -0.99
SF3A1-207ENST00000471342 HS6ST2Q96MM7 605 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 PIGQQ9BRB3 760 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 BDH2Q9BUT1 245 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 PTGES2Q9H7Z7 377 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 REEP1Q9H902 201 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 IL20Q9NYY1 176 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 NPIPA1Q9UND3 350 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 TRAPPC4Q9Y296 219 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 HIF3AQ9Y2N7 669 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 PCDHGB5Q9Y5G0 923 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 FAM215AQ9Y5M1 114 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 AP4B1Q9Y6B7 739 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 SHANK1Q9Y566 2161 aa8.85□□□□□ -0.99
SF3A1-207ENST00000471342 FREM3P0C091 2139 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 TRAV36DV7A0A075B6V5 113 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 LOC102725191A0A1B0GVB3 256 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 G3V2T6 193 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 H3BML4 177 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 PLPP3O14495 311 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 BHLHE40O14503 412 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 TRAPPC6AO75865 159 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 AQP8O94778 261 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 CCNB2O95067 398 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 PMS2P2O95744 297 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 NUDT14O95848 222 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 CH25HO95992 272 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ACTL6AO96019 429 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms