RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PYURFQ96I23 114 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZNF845Q96IR2 970 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZFP3Q96NJ6 502 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 OR5B2Q96R09 309 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 TRIB1Q96RU8 372 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 TM9SF2Q99805 663 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 TMEM43Q9BTV4 400 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZNF426Q9BUY5 554 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 TRIM15Q9C019 465 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 AMBRA1Q9C0C7 1298 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 SLC7A8Q9UHI5 535 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 TRAPPC4Q9Y296 219 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 IGKV1D-42A0A075B6H8 117 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZC3H12DA2A288 527 aaKnown RBP13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 CXCL13O43927 109 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 PRSS23O95084 383 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 LYPD3O95274 346 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 STAMBPO95630 424 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 OPN1LWP04000 364 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 CEACAM8P31997 349 aaPredicted RBP13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 DIO1P49895 249 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 CARD18P57730 90 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 NUP107P57740 925 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 TAS2R41P59536 307 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 EGR4Q05215 589 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 PON3Q15166 354 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 CYP2R1Q6VVX0 501 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 YTHDF3Q7Z739 585 aaKnown RBP13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 OFCC1Q8IZS5 231 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 ATP6V1C2Q8NEY4 427 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 OSTF1Q92882 214 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 SLC41A3Q96GZ6 507 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 ARL5BQ96KC2 179 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 C7orf34Q96L11 122 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 SRXN1Q9BYN0 137 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 MAGIXQ9H6Y5 334 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 RNF122Q9H9V4 155 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 MCTS1Q9ULC4 181 aaKnown RBP13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 SLC7A7Q9UM01 511 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 A4GNTQ9UNA3 340 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 ENPP4Q9Y6X5 453 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 MPDZO75970 2070 aa13.38□□□□□ -0.27
CDC42SE1-203ENST00000470278 DOCK7Q96N67 2140 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 MTORP42345 2549 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 A0A1W2PNR3 127 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 AQP12BA6NM10 295 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 KDM4EB2RXH2 506 aaPredicted RBP13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 TOXO94900 526 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 TFPIP10646 304 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 ITGA2P17301 1181 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 CCNA2P20248 432 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 AGAP20933 346 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 IFNA8P32881 189 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 IDUAP35475 653 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 RBM34P42696 430 aaKnown RBP13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 ADORA2A-AS1P86434 159 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 PIN1Q13526 163 aaPredicted RBP13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 SGCBQ16585 318 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 IQCCQ4KMZ1 466 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 C1orf140Q5VVS0 124 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 OR2A2Q6IF42 318 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 GDF7Q7Z4P5 450 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 TSEN54Q7Z6J9 526 aaKnown RBP13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 CYP4Z1Q86W10 505 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 AQP12AQ8IXF9 295 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 C9orf106Q8NAJ2 232 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 OR6S1Q8NH40 331 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 FNDC9Q8TBE3 224 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 RNF128Q8TEB7 428 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 RND1Q92730 232 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 PRSS27Q9BQR3 290 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 PTDSS2Q9BVG9 487 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 ANKRD19PQ9H560 264 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 NDUFAF4Q9P032 175 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 RIMS3Q9UJD0 308 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 POMPQ9Y244 141 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 NF1P21359 2839 aa13.37□□□□□ -0.27
CDC42SE1-203ENST00000470278 LIPT2A6NK58 231 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 SULT2B1O00204 365 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 FFAR1O14842 300 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 RCBTB2O95199 551 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 AHSA1O95433 338 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 SYNGR4O95473 234 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 TGM6O95932 706 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 IGF2P01344 180 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 CRHP06850 196 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 IMPDH2P12268 514 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 MAGEA2P43356 314 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 AGFG1P52594 562 aaKnown RBP13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 H3F3AP84243 136 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 VLDLRP98155 873 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 PMPCAQ10713 525 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 ST3GAL3Q11203 375 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 FLOT2Q14254 428 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 FAM69AQ5T7M9 428 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 WDR88Q6ZMY6 472 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 PIWIL3Q7Z3Z3 882 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms