RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, human

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-215	ENST00000469717	PTH2R	P49190	550 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	NCBP2	P52298	156 aa	Known RBP eCLIP	7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	TRAM2	Q15035	370 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	PRAMEF13	Q5VWM6	474 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	MEPCE	Q7L2J0	689 aa	Known RBP	7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	GDF7	Q7Z4P5	450 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	DVL3	Q92997	716 aa	Predicted RBP	7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	IGSF21	Q96ID5	467 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	LYSMD1	Q96S90	227 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	DNTTIP1	Q9H147	329 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	KCNK15	Q9H427	330 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	SYNDIG1	Q9H7V2	258 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	SYNPO2L	Q9H987	977 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	MED11	Q9P086	117 aa		7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	DHCR7	Q9UBM7	475 aa	Known RBP	7.34	□□□□□ -1.24
TPM3-215	ENST00000469717	TMEM238L	A0A1B0GVL6	79 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PRAMEF2	O60811	474 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	GKN3P	P0CG01	181 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	CTSA	P10619	480 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	NDUFV2	P19404	249 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PVALB	P20472	110 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TEAD1	P28347	426 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	MPG	P29372	298 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	MAT2A	P31153	395 aa	Known RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	RGS8	P57771	180 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PITPNA	Q00169	270 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	GUCA2A	Q02747	115 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TMEM115	Q12893	351 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	KRT33B	Q14525	404 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PRPF38B	Q5VTL8	546 aa	Known RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	SPIC	Q8N5J4	248 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	FAM71C	Q8NEG0	241 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	OR1S2	Q8NGQ3	325 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	OR51A7	Q8NH64	312 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	OSTF1	Q92882	214 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PNPLA2	Q96AD5	504 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	OTUB2	Q96DC9	234 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	ZMYND19	Q96E35	227 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TEAD3	Q99594	435 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	SPSB2	Q99619	263 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	EFCAB11	Q9BUY7	163 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	FN3K	Q9H479	309 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TAS2R5	Q9NYW4	299 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TAC3	Q9UHF0	121 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	LAMP5	Q9UJQ1	280 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	COL4A3	Q01955	1670 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	OR6C76	A6NM76	312 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717		H7BY64	318 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PIN1P1	O15428	100 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PRICKLE3	O43900	615 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	KRT33A	O76009	404 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	P2RX1	P51575	399 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	RPS11	P62280	158 aa	Known RBP eCLIP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	CBFB	Q13951	182 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	CRMP1	Q14194	572 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	B3GNTL1	Q67FW5	361 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	ZCCHC12	Q6PEW1	402 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TRAPPC5	Q8IUR0	188 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	OR13C2	Q8NGS9	318 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	C1orf216	Q8TAB5	229 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	DUSP19	Q8WTR2	217 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	AMDHD1	Q96NU7	426 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	PRAP1	Q96NZ9	151 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	MCHR1	Q99705	422 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	MICU1	Q9BPX6	476 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	SLC38A1	Q9H2H9	487 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TMEM185B	Q9H7F4	350 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	NEUROD4	Q9HD90	331 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	NOX4	Q9NPH5	578 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TAS2R10	Q9NYW0	307 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	MPTX1	A8MV57	137 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	GREM1	O60565	184 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TIMP1	P01033	207 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	APOC1	P02654	83 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	CRYBA1	P05813	215 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	C4BPB	P20851	252 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	CDK2	P24941	298 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	ART1	P52961	327 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	DMKN	Q6E0U4	476 aa	Predicted RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	MRM1	Q6IN84	353 aa	Known RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	ADCK2	Q7Z695	626 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TPRA1	Q86W33	373 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	OR5AR1	Q8NGP9	310 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	SFT2D1	Q8WV19	159 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TNFAIP8L1	Q8WVP5	186 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	RBM18	Q96H35	190 aa	Known RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	NKX2-4	Q9H2Z4	354 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	ADGRL4	Q9HBW9	690 aa		7.33	□□□□□ -1.24
TPM3-215	ENST00000469717	TRAV14DV4	A0A0A6YYC5	116 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	NPIPA5	A0A0B4J1W7	369 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	NPIPA7	E9PJI5	369 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	CCS	O14618	274 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	SLC25A12	O75746	678 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	NPIPA8	P0DM63	369 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	FPR3	P25089	353 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	CALCR	P30988	508 aa		7.32	□□□□□ -1.24
TPM3-215	ENST00000469717	NPBWR1	P48145	328 aa		7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms