RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ZNF691Q5VV52 312 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 SSX6Q7RTT6 188 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 SLC16A11Q8NCK7 471 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 SP7Q8TDD2 431 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-213ENST00000469300 NIPAL2Q9H841 368 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 BABAM2Q9NXR7 383 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 NR4A2P43354 598 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 PRAMEF20Q5VT98 475 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 PATE1Q8WXA2 126 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 FAM71F1Q96KD3 344 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-213ENST00000469300 UQCC2Q9BRT2 126 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 SIDT1Q9NXL6 827 aaKnown RBP13.97□□□□□ -0.17
LIMS2-213ENST00000469300 COQ3Q9NZJ6 369 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 POMT2Q9UKY4 750 aa13.97□□□□□ -0.17
LIMS2-213ENST00000469300 EEF1E1O43324 174 aaKnown RBP13.96□□□□□ -0.17
LIMS2-213ENST00000469300 BMP4P12644 408 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 ZNF16P17020 682 aaPredicted RBP13.96□□□□□ -0.17
LIMS2-213ENST00000469300 CHMP24386 653 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 FXYD6P3P58550 94 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 MRPS10P82664 201 aaKnown RBP13.96□□□□□ -0.17
LIMS2-213ENST00000469300 KCNJ8Q15842 424 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 FCRLBQ6BAA4 426 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 IGFN1Q86VF2 1251 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 COMMD7Q86VX2 200 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 CPT1CQ8TCG5 803 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 DNTTIP1Q9H147 329 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 C14orf119Q9NWQ9 140 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 KLHL13Q9P2N7 655 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 ALPLP05186 524 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 BMXP51813 675 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 GRINAQ7Z429 371 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 PDZD9Q8IXQ8 264 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 ZNF611Q8N823 705 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 OR1J2Q8NGS2 313 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 STT3BQ8TCJ2 826 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 B3GNT3Q9Y2A9 372 aa13.96□□□□□ -0.17
LIMS2-213ENST00000469300 TMEM184BQ9Y519 407 aaPredicted RBP13.96□□□□□ -0.17
LIMS2-213ENST00000469300 A0A1W2PR48 441 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 I6L893 689 aaPredicted RBP13.96□□□□□ -0.18
LIMS2-213ENST00000469300 UQCRC1P31930 480 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 PPICP45877 212 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 KIAA1211LQ6NV74 962 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 SLC35F3Q8IY50 421 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 GDPD1Q8N9F7 314 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 OR2A1Q8NGT9 310 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 ALG14Q96F25 216 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 ABCG5Q9H222 651 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 ADAM18Q9Y3Q7 739 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 IGLV3-16A0A075B6K0 115 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 PLSCR5A0PG75 271 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 ZNF850A8MQ14 1090 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 STMND1H3BQB6 276 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 B4GAT1O43505 415 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 FPR3P25089 353 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 SOX3P41225 446 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 MECP2P51608 486 aaKnown RBP13.96□□□□□ -0.18
LIMS2-213ENST00000469300 CDNFQ49AH0 187 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 SYT3Q9BQG1 590 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 EDEM2Q9BV94 578 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 NPFFR2Q9Y5X5 522 aa13.96□□□□□ -0.18
LIMS2-213ENST00000469300 A0A087WV62 115 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 GNRHRP30968 328 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 MAN2A2P49641 1150 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 TRA2AQ13595 282 aaKnown RBP eCLIP13.95□□□□□ -0.18
LIMS2-213ENST00000469300 DHRS4L2Q6PKH6 230 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 Q6ZS52 159 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 ZNF683Q8IZ20 524 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 PRRX2Q99811 253 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 KATNB1Q9BVA0 655 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 PPA2Q9H2U2 334 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 LOC100509620A0A075B734 347 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 TVP23AA6NH52 213 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 DPY19L2P2Q6ZN68 376 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 SPRED1Q7Z699 444 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 OR13C2Q8NGS9 318 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 SLC7A13Q8TCU3 470 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 TCTEX1D2Q8WW35 142 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 MRGPRX3Q96LB0 322 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 ZNF471Q9BX82 626 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-213ENST00000469300 KLHL9Q9P2J3 617 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 COL4A5P29400 1685 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 C13orf42A0A1B0GVH6 325 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 LCKP06239 509 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 NID1P14543 1247 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 ENPP1P22413 925 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 STK11Q15831 433 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 SAXO2Q658L1 398 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 GALNT11Q8NCW6 608 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 CASTOR1Q8WTX7 329 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 GABRG3Q99928 467 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 ZNF175Q9Y473 711 aa13.95□□□□□ -0.18
LIMS2-213ENST00000469300 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-213ENST00000469300 TRBV4-1A0A0J9YWV2 114 aa13.94□□□□□ -0.18
LIMS2-213ENST00000469300 C1orf196B1AJZ1 125 aa13.94□□□□□ -0.18
LIMS2-213ENST00000469300 CD14P08571 375 aa13.94□□□□□ -0.18
LIMS2-213ENST00000469300 PRSS3P35030 304 aa13.94□□□□□ -0.18
LIMS2-213ENST00000469300 ZNF91Q05481 1191 aa13.94□□□□□ -0.18
LIMS2-213ENST00000469300 MLLT11Q13015 90 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-213ENST00000469300 EIF3IQ13347 325 aaKnown RBP13.94□□□□□ -0.18
LIMS2-213ENST00000469300 RTL6Q6ICC9 239 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms