RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CD79BP40259 229 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 RFC3P40938 356 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 NCF4Q15080 339 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 UBE3DQ7Z6J8 389 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 NRMQ8IXM6 262 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 ZDHHC1Q8WTX9 485 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 BMFQ96LC9 184 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 SLC38A2Q96QD8 506 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 NEUROD4Q9HD90 331 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 A0A1W2PPV9 198 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 SLC31A2O15432 143 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 HCRTR1O43613 425 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 CRYBA1P05813 215 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 CHRM4P08173 479 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ARAFP10398 606 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 LAP3P28838 519 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 KIR2DL1P43626 348 aaPredicted RBP11.42□□□□□ -0.58
USP11-206ENST00000469080 CRISP1P54107 249 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 VEZF1Q14119 521 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ODF4Q2M2E3 257 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ALG11Q2TAA5 492 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 AVPI1Q5T686 147 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ABHD17CQ6PCB6 329 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ZNF613Q6PF04 617 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 TSSK4Q6SA08 328 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 IKBIPQ70UQ0 350 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 RTL10Q7L3V2 364 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 LAS2Q8IYD9 372 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 OR4K14Q8NGD5 310 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 GGHQ92820 318 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 KLHDC7BQ96G42 594 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ZC3H10Q96K80 434 aaKnown RBP11.42□□□□□ -0.58
USP11-206ENST00000469080 PTCHD1Q96NR3 888 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 MGLLQ99685 303 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ACER3Q9NUN7 267 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 GPR55Q9Y2T6 319 aaPredicted RBP11.42□□□□□ -0.58
USP11-206ENST00000469080 TANC1Q9C0D5 1861 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 LOC390937A0A1W2PQ73 354 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 A0A1W2PQF6 199 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 CPED1A4D0V7 1026 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 L7N2F9 121 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 TNFP01375 233 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 NMBP08949 121 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 UGT2B7P16662 529 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 GRPRP30550 384 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 TRHRP34981 398 aaPredicted RBP11.42□□□□□ -0.58
USP11-206ENST00000469080 OR1D4P47884 311 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 PDX1P52945 283 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 GK2Q14410 553 aaPredicted RBP11.42□□□□□ -0.58
USP11-206ENST00000469080 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
USP11-206ENST00000469080 DDI2Q5TDH0 399 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 KDM4DQ6B0I6 523 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 CSNK1A1LQ8N752 337 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 OR2L5Q8NG80 312 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ELP5Q8TE02 316 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 OR7D2Q96RA2 312 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 ADAT1Q9BUB4 502 aaKnown RBP11.42□□□□□ -0.58
USP11-206ENST00000469080 OR8D2Q9GZM6 311 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 MED11Q9P086 117 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 POFUT2Q9Y2G5 429 aa11.42□□□□□ -0.58
USP11-206ENST00000469080 A0A1W2PRQ8 180 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 TMEM200CA6NKL6 621 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 PEX12O00623 359 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 PIP5K1CO60331 668 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 REM1O75628 298 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 ITPKBP27987 946 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 RORAP35398 523 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 EIF2S3P41091 472 aaKnown RBP11.41□□□□□ -0.58
USP11-206ENST00000469080 RAB30Q15771 203 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 TCTN3Q6NUS6 607 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 NKAIN4Q8IVV8 208 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 GPR32P1Q8NGA4 272 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 OR52P1PQ8NH57 321 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 DTD1Q8TEA8 209 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 S100PBPQ96BU1 408 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 TMED9Q9BVK6 235 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 DPH1Q9BZG8 443 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 NRSN2Q9GZP1 204 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 MAGIXQ9H6Y5 334 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
USP11-206ENST00000469080 DENND4CQ5VZ89 1909 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 ANXA2P2A6NMY6 339 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 LRRN3E7EW58 273 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 SELENOFO60613 162 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 RPL4P36578 427 aaKnown RBP11.41□□□□□ -0.58
USP11-206ENST00000469080 KHKP50053 298 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 EIF2S3LQ2VIR3 472 aaKnown RBP11.41□□□□□ -0.58
USP11-206ENST00000469080 ZNF791Q3KP31 576 aaPredicted RBP11.41□□□□□ -0.58
USP11-206ENST00000469080 CARFQ8N187 725 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 OR51G2Q8NGK0 314 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 WBP1Q96G27 269 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 C1QTNF2Q9BXJ5 285 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 LRRN3Q9H3W5 708 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 EMC7Q9NPA0 242 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 FSCN3Q9NQT6 498 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 DHCR7Q9UBM7 475 aaKnown RBP11.41□□□□□ -0.58
USP11-206ENST00000469080 KCNK7Q9Y2U2 307 aa11.41□□□□□ -0.58
USP11-206ENST00000469080 MAGEB4O15481 346 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms