RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 TMEM43Q9BTV4 400 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 C9orf16Q9BUW7 83 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 SERINC1Q9NRX5 453 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 IL20RAQ9UHF4 553 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 TMEFF2Q9UIK5 374 aaPredicted RBP18.18■□□□□ 0.5
SPIN1-203ENST00000469017 MRPS18CQ9Y3D5 142 aaKnown RBP18.18■□□□□ 0.5
SPIN1-203ENST00000469017 RELNP78509 3460 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 TRGV5A0A0B4J1U4 118 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 IMPDH2P12268 514 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 ZNF26P17031 533 aaPredicted RBP18.18■□□□□ 0.5
SPIN1-203ENST00000469017 PPP2R2BQ00005 443 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 PRKCDQ05655 676 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 MYBPHQ13203 477 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 GLYR1Q49A26 553 aaPredicted RBP18.18■□□□□ 0.5
SPIN1-203ENST00000469017 RPUSD3Q6P087 351 aaKnown RBP18.18■□□□□ 0.5
SPIN1-203ENST00000469017 NRBF2Q96F24 287 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 TACO1Q9BSH4 297 aaKnown RBP18.18■□□□□ 0.5
SPIN1-203ENST00000469017 OSBPL10Q9BXB5 764 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 ACKR4Q9NPB9 350 aa18.18■□□□□ 0.5
SPIN1-203ENST00000469017 TRAV27A0A087WT01 109 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 A0A0J9YW62 118 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 ERVH48-1M5A8F1 160 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 SOX14O95416 240 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 SAGP10523 405 aaPredicted RBP18.17■□□□□ 0.5
SPIN1-203ENST00000469017 POU3F2P20265 443 aaPredicted RBP18.17■□□□□ 0.5
SPIN1-203ENST00000469017 OR7A5Q15622 319 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 ZIK1Q3SY52 487 aaPredicted RBP18.17■□□□□ 0.5
SPIN1-203ENST00000469017 C1orf94Q6P1W5 598 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 SLC46A3Q7Z3Q1 461 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 GGNQ86UU5 652 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 OR13C2Q8NGS9 318 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 NEIL3Q8TAT5 605 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 DDIT4LQ96D03 193 aa18.17■□□□□ 0.5
SPIN1-203ENST00000469017 EIF1AYO14602 144 aaKnown RBP18.16■□□□□ 0.5
SPIN1-203ENST00000469017 ALPLP05186 524 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 POLR2IP36954 125 aaKnown RBP18.16■□□□□ 0.5
SPIN1-203ENST00000469017 LHX2P50458 406 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 RAC1P63000 192 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 DAG1Q14118 895 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 FAHD1Q6P587 224 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 ABTB1Q969K4 478 aaPredicted RBP18.16■□□□□ 0.5
SPIN1-203ENST00000469017 SNRNP40Q96DI7 357 aaKnown RBP18.16■□□□□ 0.5
SPIN1-203ENST00000469017 QPCTLQ9NXS2 382 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 ZFYVE26Q68DK2 2539 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 ZNF208O43345 1280 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 ELK4P28324 431 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 ZNF74Q16587 644 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.16■□□□□ 0.5
SPIN1-203ENST00000469017 KLHL17Q6TDP4 642 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 FAM180AQ6UWF9 173 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 RNF113BQ8IZP6 322 aaKnown RBP18.16■□□□□ 0.5
SPIN1-203ENST00000469017 OR51A7Q8NH64 312 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 SGTBQ96EQ0 304 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 GABARAPL1Q9H0R8 117 aa18.16■□□□□ 0.5
SPIN1-203ENST00000469017 TRAV36DV7A0A075B6V5 113 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 IGHV3-15A0A0B4J1V0 119 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 A0A1B0GTH9 108 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 BGLAPP02818 100 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 EPHA2P29317 976 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 CTBP2P56545 445 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 CTU2Q2VPK5 515 aaKnown RBP18.15■□□□□ 0.5
SPIN1-203ENST00000469017 KDM4DQ6B0I6 523 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 Q6ZPB1 254 aaPredicted RBP18.15■□□□□ 0.5
SPIN1-203ENST00000469017 STK35Q8TDR2 534 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 KLHL4Q9C0H6 718 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 ENKD1Q9H0I2 346 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 EGLN3Q9H6Z9 239 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 ASF1BQ9NVP2 202 aa18.15■□□□□ 0.5
SPIN1-203ENST00000469017 EFCAB9A8MZ26 197 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 KLF4O43474 513 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 AHSA1O95433 338 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 SNAP29O95721 258 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 IGFBP5P24593 272 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 DIO1P49895 249 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 ALDH3A2P51648 485 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 AQP4P55087 323 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 KLRB1Q12918 225 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 PPP4R4Q6NUP7 873 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 KIF18BQ86Y91 864 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 KDM8Q8N371 416 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 ZNF845Q96IR2 970 aaPredicted RBP18.14■□□□□ 0.5
SPIN1-203ENST00000469017 KLHL15Q96M94 604 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 RBM4BQ9BQ04 359 aaKnown RBP18.14■□□□□ 0.5
SPIN1-203ENST00000469017 RBM4Q9BWF3 364 aaKnown RBP18.14■□□□□ 0.5
SPIN1-203ENST00000469017 KRT84Q9NSB2 600 aa18.14■□□□□ 0.5
SPIN1-203ENST00000469017 GTF3C1Q12789 2109 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 COL6A6A6NMZ7 2263 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 ZNF814B7Z6K7 855 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 NPIPA2E9PIF3 369 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 NPIPA3F8WFD2 350 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 DLGAP1O14490 977 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 OR7A10O76100 309 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 IGHG3P01860 377 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 CHMP24386 653 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 MLLT10P55197 1068 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 CLDN18P56856 261 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 GNPDA2Q8TDQ7 276 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 TNFRSF13CQ96RJ3 184 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 TIMP4Q99727 224 aa18.14■□□□□ 0.49
SPIN1-203ENST00000469017 SRXN1Q9BYN0 137 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms