RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 KLHL13Q9P2N7 655 aa9.92□□□□□ -0.82
COL4A6-205ENST00000468338 CORO2BQ9UQ03 480 aa9.92□□□□□ -0.82
COL4A6-205ENST00000468338 TRAPPC4Q9Y296 219 aa9.92□□□□□ -0.82
COL4A6-205ENST00000468338 HDGFL3Q9Y3E1 203 aa9.92□□□□□ -0.82
COL4A6-205ENST00000468338 TESMINQ9Y4I5 508 aa9.92□□□□□ -0.82
COL4A6-205ENST00000468338 SPIN1Q9Y657 262 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-205ENST00000468338 IGKV3D-15A0A087WSY6 115 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 UQCRHLA0A096LP55 91 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 TMED7-TICAM2A0A0A6YYA0 188 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 SH3D21A4FU49 640 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 ZNF724A8MTY0 619 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 C16orf97H3BN30 126 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 SULT2B1O00204 365 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 PLGP00747 810 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 YES1P07947 543 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 GKN3PP0CG01 181 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 TROVE2P10155 538 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 PRG2P13727 222 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 POU2F1P14859 743 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 KLK2P20151 261 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 TACR3P29371 465 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 CPOXP36551 454 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 POLR2HP52434 150 aaKnown RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 CSNK2A1P68400 391 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 CDK6Q00534 326 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 PDK3Q15120 406 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 HSP90B2PQ58FF3 399 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 ABLIM2Q6H8Q1 611 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 REEP3Q6NUK4 255 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 STAC2Q6ZMT1 411 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 ZNF550Q7Z398 422 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 NUFIP2Q7Z417 695 aaKnown RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 MTDHQ86UE4 582 aaKnown RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 TMEM200AQ86VY9 491 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 TUSC5Q8IXB3 177 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 GABRG1Q8N1C3 465 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 REXO5Q96IC2 774 aaKnown RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 WFIKKN1Q96NZ8 548 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 CGREF1Q99674 301 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 GPATCH1Q9BRR8 931 aaKnown RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 TACO1Q9BSH4 297 aaKnown RBP9.91□□□□□ -0.82
COL4A6-205ENST00000468338 OR11A1Q9GZK7 315 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 OR10A4Q9H209 315 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 SAR1AQ9NR31 198 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 KLHL9Q9P2J3 617 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 NDRG3Q9UGV2 375 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 TMED7Q9Y3B3 224 aa9.91□□□□□ -0.82
COL4A6-205ENST00000468338 IGHV3-15A0A0B4J1V0 119 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 TMEM72A0PK05 275 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 EVPLLA8MZ36 301 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 FBP2O00757 339 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 ANGPT2O15123 496 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 NPIPB7O75200 414 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 GCM2O75603 506 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 HRGP04196 525 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 UQCRBP14927 111 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 PSMB1P20618 241 aaKnown RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 ADSLP30566 484 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 PRKAR1BP31321 381 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 MDH1P40925 334 aaKnown RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 GZMMP51124 257 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 ARFIP2P53365 341 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 SLC16A1P53985 500 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 PCBP3P57721 371 aaKnown RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 TESK1Q15569 626 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 COQ5Q5HYK3 327 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 ZNF311Q5JNZ3 666 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 WBP2NLQ6ICG8 309 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 PPP4R4Q6NUP7 873 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 DHRS4L2Q6PKH6 230 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 TFAP2EQ6VUC0 442 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 BEND4Q6ZU67 534 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 NET1Q7Z628 596 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 DHDDSQ86SQ9 333 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 SERPINA11Q86U17 422 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 CDH24Q86UP0 819 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 CDC20BQ86Y33 519 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 PTOV1Q86YD1 416 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 LURAP1LQ8IV03 231 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 NFKBIDQ8NI38 313 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 UBASH3BQ8TF42 649 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 POLDIP3Q9BY77 421 aaKnown RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 POTEKPQ9BYX7 375 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 ARMC7Q9H6L4 198 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 KAT8Q9H7Z6 458 aaKnown RBP9.9□□□□□ -0.82
COL4A6-205ENST00000468338 PLEKHF2Q9H8W4 249 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 TMEM181Q9P2C4 612 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 KLHL14Q9P2G3 628 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 OTOGQ6ZRI0 2925 aa9.9□□□□□ -0.82
COL4A6-205ENST00000468338 CADP27708 2225 aa9.9□□□□□ -0.83
COL4A6-205ENST00000468338 F8P00451 2351 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 HRNRQ86YZ3 2850 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-205ENST00000468338 A0A1W2PPR1 153 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 ZC3H12DA2A288 527 aaKnown RBP9.89□□□□□ -0.83
COL4A6-205ENST00000468338 ANKRD34BA5PLL1 514 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 MEGF11A6BM72 1044 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 ENO4A6NNW6 628 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 ZNF716A6NP11 495 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms