RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ZNF621Q6ZSS3 439 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 LRRC34Q8IZ02 419 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 KIRREL3Q8IZU9 778 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 MREGQ8N565 214 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 WDR31Q8NA23 367 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 SPATA3Q8NHX4 192 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 PMM1Q92871 262 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 PAIP2Q9BPZ3 127 aaKnown RBP18.49■□□□□ 0.55
COL9A3-207ENST00000467819 KCNK9Q9NPC2 374 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 SLC7A10Q9NS82 523 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 AIG1Q9NVV5 245 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 ATP23Q9Y6H3 246 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 PDLIM1O00151 329 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 ZNF208O43345 1280 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 NR2F1P10589 423 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 IL12AP29459 219 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 SLC1A3P43003 542 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 SLC25A3Q00325 362 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 MPP2Q14168 576 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 GNA13Q14344 377 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 RAB35Q15286 201 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 COX20Q5RI15 118 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 TSPO2Q5TGU0 170 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 OGFOD2Q6N063 350 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 HIPK1Q86Z02 1210 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 OR52E6Q96RD3 313 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 SLC17A5Q9NRA2 495 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 PARPBPQ9NWS1 579 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 DCTN4Q9UJW0 460 aa18.48■□□□□ 0.55
COL9A3-207ENST00000467819 CFAP73A6NFT4 308 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 A8MV72 311 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-207ENST00000467819 SDHDO14521 159 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 PGRP06401 933 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 DBIP07108 87 aaKnown RBP18.47■□□□□ 0.55
COL9A3-207ENST00000467819 UQCRBP14927 111 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 RPS4Y1P22090 263 aaKnown RBP18.47■□□□□ 0.55
COL9A3-207ENST00000467819 BST1Q10588 318 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 EPS8Q12929 822 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 SLC17A1Q14916 467 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 OTUD3Q5T2D3 398 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-207ENST00000467819 PAQR6Q6TCH4 344 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 ZNF525Q8N782 197 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 REPIN1Q9BWE0 567 aaKnown RBP18.47■□□□□ 0.55
COL9A3-207ENST00000467819 AMBRA1Q9C0C7 1298 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 MTHFD2LQ9H903 347 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-207ENST00000467819 AMDHD2Q9Y303 409 aa18.47■□□□□ 0.55
COL9A3-207ENST00000467819 A0A096LNT2 108 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 FAAHO00519 579 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 TXNL4AP83876 142 aaKnown RBP18.46■□□□□ 0.55
COL9A3-207ENST00000467819 CEACAM7Q14002 265 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 PEX5LQ8IYB4 626 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 C17orf78Q8N4C9 275 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 TMEM99Q8N816 258 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 C1orf162Q8NEQ5 155 aaPredicted RBP18.46■□□□□ 0.55
COL9A3-207ENST00000467819 OR10H5Q8NGA6 315 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 ZBTB18Q99592 522 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 FKRPQ9H9S5 495 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 RLIMQ9NVW2 624 aa18.46■□□□□ 0.55
COL9A3-207ENST00000467819 AKR7A3O95154 331 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 GKN3PP0CG01 181 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 CDH2P19022 906 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-207ENST00000467819 CXCR1P25024 350 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 EPHA3P29320 983 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 DSCR9P59020 149 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 TGFBR3Q03167 851 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 OR7A5Q15622 319 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 TMEM249Q2WGJ8 235 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 CEP85LQ5SZL2 805 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 C6orf52Q5T4I8 152 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 ZNF544Q6NX49 715 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 PODNL1Q6PEZ8 512 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 SPATA19Q7Z5L4 167 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 VRK2Q86Y07 508 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 ANKRD42Q8N9B4 389 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 WDR55Q9H6Y2 383 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-207ENST00000467819 MANSC1Q9H8J5 431 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 GPR45Q9Y5Y3 372 aa18.45■□□□□ 0.54
COL9A3-207ENST00000467819 RNF212BA8MTL3 300 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 ATP6V1G2-DDX39BF2Z307 99 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 H7C417 338 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 IFNA2P01563 188 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 GPIP06744 558 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 MPGP29372 298 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 MAP2K6P52564 334 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 CHRFAM7AQ494W8 412 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 HHATQ5VTY9 493 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 KLHL24Q6TFL4 600 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 ZNF836Q6ZNA1 936 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 AAED1Q7RTV5 226 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 GPAT4Q86UL3 456 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 ZNF440Q8IYI8 595 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 CADM2Q8N3J6 435 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 OR9K2Q8NGE7 335 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 TMEM45BQ96B21 275 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 ZNF385AQ96PM9 386 aaKnown RBP18.44■□□□□ 0.54
COL9A3-207ENST00000467819 TNFRSF13CQ96RJ3 184 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 ADAM19Q9H013 955 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 SLC6A13Q9NSD5 602 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 P2RX2Q9UBL9 471 aa18.44■□□□□ 0.54
COL9A3-207ENST00000467819 MALRD1Q5VYJ5 2156 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms