RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ZNF559Q9BR84 538 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 CACNG6Q9BXT2 260 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 PCED1AQ9H1Q7 454 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 CHRDQ9H2X0 955 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 HEXA-AS1Q9H8Q6 139 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 MCCC2Q9HCC0 563 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 C14orf105Q9NVL8 296 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 EVA1BQ9NVM1 165 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 FLRT3Q9NZU0 649 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 ZNF222Q9UK12 451 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 FBXL21Q9UKT6 434 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 U3KQ87 197 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 A0A1W2PQ72 361 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 GSTZ1O43708 216 aaPredicted RBP13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 SERPINA3P01011 423 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 TPOP07202 933 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 NGFRP08138 427 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 NT5EP21589 574 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 CD27P26842 260 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 RPS11P62280 158 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 PITPNAQ00169 270 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 MGAT2Q10469 447 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 SIGIRRQ6IA17 410 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 FIGNL1Q6PIW4 674 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 RTL4Q6ZR62 310 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 RFPL4BQ6ZWI9 263 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 ZNF761Q86XN6 746 aaPredicted RBP13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 TIGD4Q8IY51 512 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 ELMOD2Q8IZ81 293 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 OR51Q1Q8NH59 317 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 THAP4Q8WY91 577 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 SMIM19Q96E16 107 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 PELI1Q96FA3 418 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 SHDQ96IW2 340 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 LRRC61Q9BV99 259 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 IL21RQ9HBE5 538 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 TMEM27Q9HBJ8 222 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 LYRM4Q9HD34 91 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 SERTAD3Q9UJW9 196 aa13.54□□□□□ -0.24
PRPF38B-204ENST00000467302 GXYLT2A0PJZ3 443 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 LINC00862A6NCI5 91 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 OR5K3A6NET4 321 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 CTDSPLO15194 276 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 FGF17O60258 216 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 LDB3O75112 727 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 TSC22D2O75157 780 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 SLC22A5O76082 557 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 AK1P00568 194 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 TFP02787 698 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 UCHL1P09936 223 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 ANKRD34CP0C6C1 535 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 UQCRC1P31930 480 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 STARD6P59095 220 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 KLF9Q13886 244 aaPredicted RBP13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 CDK5R1Q15078 307 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 PRICKLE4Q2TBC4 344 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 MANEAQ5SRI9 462 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 ARMC6Q6NXE6 501 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 ZAR1Q86SH2 424 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 SYT9Q86SS6 491 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 DEFB119Q8N690 84 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 AVL9Q8NBF6 648 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 TMEM52Q8NDY8 209 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 GRHL3Q8TE85 626 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 CNOT9Q92600 299 aaKnown RBP13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 MS4A3Q96HJ5 214 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 C7orf50Q9BRJ6 194 aaKnown RBP13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 ZNF275Q9NSD4 429 aaPredicted RBP13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 ICAM5Q9UMF0 924 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 CLEC4AQ9UMR7 237 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 CAMK2AQ9UQM7 478 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 AUP1Q9Y679 476 aa13.53□□□□□ -0.24
PRPF38B-204ENST00000467302 A0A1B0GWA3 101 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 ZNF860A6NHJ4 632 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 METTL12A8MUP2 240 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 B4DGG1 531 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 LRRN3E7EW58 273 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 FLRT2O43155 660 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 ICMTO60725 284 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 ADAM11O75078 769 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 RAF1P04049 648 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 SULT1A3P0DMM9 295 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 SULT1A4P0DMN0 295 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 TYRP1P17643 537 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 CCR6P51684 374 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 HCCSP53701 268 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 DYRK1AQ13627 763 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 TP53I3Q53FA7 332 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 ARHGAP11AQ6P4F7 1023 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 BAIAP2L2Q6UXY1 529 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 BTN2A1Q7KYR7 527 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 CCDC28AQ8IWP9 274 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 TMEFF1Q8IYR6 380 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 SYS1Q8N2H4 156 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 SLC43A2Q8N370 569 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 ZNF680Q8NEM1 530 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 MARVELD3Q96A59 401 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 LRRN3Q9H3W5 708 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms