RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 GKN3PP0CG01 181 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 ETFAP13804 333 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 ACVR1BP36896 505 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 FABP6P51161 128 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 SLC16A1P53985 500 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 WDR4P57081 412 aaKnown RBP15.44■□□□□ 0.06
COL7A1-206ENST00000466591 EPS8Q12929 822 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 CEACAM7Q14002 265 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 ZSWIM7Q19AV6 140 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 TNFAIP8L3Q5GJ75 292 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 WBP2NLQ6ICG8 309 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 ZNF836Q6ZNA1 936 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 AAED1Q7RTV5 226 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 ABHD12BQ7Z5M8 362 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-206ENST00000466591 VRK2Q86Y07 508 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 MAPK1IP1LQ8NDC0 245 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 OR52E4Q8NGH9 312 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 KCNS3Q9BQ31 491 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 SLCO5A1Q9H2Y9 848 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 RAD21L1Q9H4I0 556 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 FKRPQ9H9S5 495 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 TPT1P8Q9HAU6 139 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 RLIMQ9NVW2 624 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 ZIM2Q9NZV7 527 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 RPS6KB2Q9UBS0 482 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 AMDHD2Q9Y303 409 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 ATP23Q9Y6H3 246 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 FAAHO00519 579 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 SSX4O60224 188 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 SNNO75324 88 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-206ENST00000466591 PGM3O95394 542 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 PTNP21246 168 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 POLR2JP52435 117 aaKnown RBP15.43■□□□□ 0.06
COL7A1-206ENST00000466591 SLC9B1Q4ZJI4 515 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 PAQR6Q6TCH4 344 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 IGFBPL1Q8WX77 278 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 RHNO1Q9BSD3 238 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 TRAF4Q9BUZ4 470 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-206ENST00000466591 REG4Q9BYZ8 158 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 NPAP1Q9NZP6 1156 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 MALT1Q9UDY8 824 aa15.43■□□□□ 0.06
COL7A1-206ENST00000466591 ZNF443Q9Y2A4 671 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-206ENST00000466591 SHISA9B4DS77 424 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 OVOL3O00110 214 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 POLR3GO15318 223 aaPredicted RBP15.42■□□□□ 0.06
COL7A1-206ENST00000466591 AKR7A3O95154 331 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 WNT11O96014 354 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 IMPDH2P12268 514 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 CD40P25942 277 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 PRPS1P60891 318 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 IL1RL1Q01638 556 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 RAB35Q15286 201 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 PGGHGQ32M88 737 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 ZNF311Q5JNZ3 666 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 RPS26P11Q5JNZ5 115 aaPredicted RBP15.42■□□□□ 0.06
COL7A1-206ENST00000466591 PRAMEF8Q5VWM4 474 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 PRAMEF7Q5VXH5 474 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 CLEC2AQ6UVW9 174 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 MSANTD1Q6ZTZ1 278 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 DHRS9Q9BPW9 319 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 CACNG6Q9BXT2 260 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 IFT52Q9Y366 437 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 FLVCR1Q9Y5Y0 555 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 NAV3Q8IVL0 2385 aa15.42■□□□□ 0.06
COL7A1-206ENST00000466591 NIPBLQ6KC79 2804 aaeCLIP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 A0A096LPI6 279 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 A0A0G2JPF8 293 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 ZC3H12DA2A288 527 aaKnown RBP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 CDHR4A6H8M9 788 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 A8MVM7 634 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 HNRNPCL2B2RXH8 293 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 HNRNPCL3B7ZW38 293 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 HNRNPCL1O60812 293 aaKnown RBP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 ADAM11O75078 769 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 AHSA1O95433 338 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 IGHV4-39P01824 125 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 HNRNPCL4P0DMR1 293 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 RPS4Y1P22090 263 aaKnown RBP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 GABRA6Q16445 453 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 MUC15Q8N387 334 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 C17orf78Q8N4C9 275 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 POMGNT2Q8NAT1 580 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 C1orf162Q8NEQ5 155 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 OR9K2Q8NGE7 335 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 RNF217Q8TC41 542 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 SLC38A5Q8WUX1 472 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 DYDC1Q8WWB3 177 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 VPS33AQ96AX1 596 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 AURKBQ96GD4 344 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 TMEM19Q96HH6 336 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 SF3B5Q9BWJ5 86 aaKnown RBP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 SLC7A10Q9NS82 523 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 CBLN4Q9NTU7 201 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 DCTN4Q9UJW0 460 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 GDF2Q9UK05 429 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-206ENST00000466591 SLC13A4Q9UKG4 626 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 SLC25A15Q9Y619 301 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 FREM1Q5H8C1 2179 aa15.41■□□□□ 0.06
COL7A1-206ENST00000466591 ROS1P08922 2347 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms