RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 GALNT8Q9NY28 637 aa8.44□□□□□ -1.06
SDCCAG3-208ENST00000466579 ELOVL5Q9NYP7 299 aa8.44□□□□□ -1.06
SDCCAG3-208ENST00000466579 KLHL9Q9P2J3 617 aa8.44□□□□□ -1.06
SDCCAG3-208ENST00000466579 FREM1Q5H8C1 2179 aa8.44□□□□□ -1.06
SDCCAG3-208ENST00000466579 APCP25054 2843 aa8.44□□□□□ -1.06
SDCCAG3-208ENST00000466579 IGKV1D-42A0A075B6H8 117 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 A0A087WUJ7 227 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 FAM221AA4D161 298 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 ZNF716A6NP11 495 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 FTCDNL1E5RQL4 147 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 M0R3H8 397 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 EIF1BO60739 113 aaKnown RBP8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 LYPD3O95274 346 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 IFNA14P01570 189 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 OPN1SWP03999 348 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 GPIP06744 558 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 YES1P07947 543 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 TFPIP10646 304 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 PRF1P14222 555 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 IDUAP35475 653 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 GSK3BP49841 420 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 P2RY4P51582 365 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 CTBP2P56545 445 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 PSME3P61289 254 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 LIPEQ05469 1076 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 RASGEF1BQ0VAM2 473 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 OR1Q1Q15612 314 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 GKAP1Q5VSY0 366 aaPredicted RBP8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 C1orf140Q5VVS0 124 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 ULK3Q6PHR2 472 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 PAQR6Q6TCH4 344 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 RANBP3LQ86VV4 465 aaPredicted RBP8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 TUSC5Q8IXB3 177 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 ZNF610Q8N9Z0 462 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 OR6S1Q8NH40 331 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 PIGXQ8TBF5 258 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 ZHX1-C8orf76Q96EF9 292 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 SLC47A1Q96FL8 570 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 PTDSS2Q9BVG9 487 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 RBM24Q9BX46 236 aaKnown RBP8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 OPN3Q9H1Y3 402 aaPredicted RBP8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 ALG2Q9H553 416 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 TMEM27Q9HBJ8 222 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 SPAG4Q9NPE6 437 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 ARL8BQ9NVJ2 186 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 TAGLN3Q9UI15 199 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 SLC13A4Q9UKG4 626 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 BAG5Q9UL15 447 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 CLEC4AQ9UMR7 237 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 PROCRQ9UNN8 238 aa8.43□□□□□ -1.06
SDCCAG3-208ENST00000466579 IGHV3-15A0A0B4J1V0 119 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 AQP7P3A6NL99 342 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 ZNF814B7Z6K7 855 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 PLGP00747 810 aaPredicted RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 THY1P04216 161 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 CCNA2P20248 432 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 FPR1P21462 350 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 SSTR2P30874 369 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 UQCRC1P31930 480 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 CD79BP40259 229 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 OR2B6P58173 313 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 SELENOWP63302 87 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 SIRPAP78324 504 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 BNIP2Q12982 314 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 SLC17A1Q14916 467 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 DAZAP2Q15038 168 aaPredicted RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 CYBRD1Q53TN4 286 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 ALG10BQ5I7T1 473 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 TMEM201Q5SNT2 666 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 TFAP2EQ6VUC0 442 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 NUFIP2Q7Z417 695 aaKnown RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 GDF7Q7Z4P5 450 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 LUZP2Q86TE4 346 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 TSPYL5Q86VY4 417 aaPredicted RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 RBM45Q8IUH3 476 aaKnown RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 MCEMP1Q8IX19 187 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 PGAM4Q8N0Y7 254 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 FITM2Q8N6M3 262 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 CCDC197Q8NCU1 140 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 MFSD8Q8NHS3 518 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 SLC26A7Q8TE54 656 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 FAM222BQ8WU58 562 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 MCHR1Q99705 422 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 NAA11Q9BSU3 229 aaPredicted RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 TMEM43Q9BTV4 400 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 ZNF426Q9BUY5 554 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 SF3B5Q9BWJ5 86 aaKnown RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 PRR14Q9BWN1 585 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 POLR2J2Q9GZM3 115 aaKnown RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 POLR2J3Q9H1A7 115 aaKnown RBP8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 OR10A4Q9H209 315 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 RPS6KB2Q9UBS0 482 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 CD300AQ9UGN4 299 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 SLC9A8Q9Y2E8 581 aa8.42□□□□□ -1.06
SDCCAG3-208ENST00000466579 TRAV36DV7A0A075B6V5 113 aa8.41□□□□□ -1.06
SDCCAG3-208ENST00000466579 ELOA3DA6NLF2 546 aaPredicted RBP8.41□□□□□ -1.06
SDCCAG3-208ENST00000466579 CXCR6O00574 342 aa8.41□□□□□ -1.06
SDCCAG3-208ENST00000466579 GPR171O14626 319 aa8.41□□□□□ -1.06
SDCCAG3-208ENST00000466579 CHP2O43745 196 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms