RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 A8MVM7 634 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 H3BML4 177 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 CTAG2O75638 210 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 KRT36O76013 467 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 CPN1P15169 458 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 BMP7P18075 431 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 PLAURQ03405 335 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 TOMM34Q15785 309 aaPredicted RBP15.67■□□□□ 0.1
CPSF4-209ENST00000465132 RIPPLY2Q5TAB7 128 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 ESPNLQ6ZVH7 1005 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 RRM2BQ7LG56 351 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 ZDHHC21Q8IVQ6 265 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 LILRA2Q8N149 483 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 PIK3C3Q8NEB9 887 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 STK35Q8TDR2 534 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 SLC38A4Q969I6 547 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 C3orf49Q96BT1 292 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 ZNF300Q96RE9 604 aaPredicted RBP15.67■□□□□ 0.1
CPSF4-209ENST00000465132 FOXC2Q99958 501 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 TMUB1Q9BVT8 246 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 SLC19A3Q9BZV2 496 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 KRCC1Q9NPI7 259 aaPredicted RBP15.67■□□□□ 0.1
CPSF4-209ENST00000465132 RIMS3Q9UJD0 308 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 AURKCQ9UQB9 309 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 TMED7Q9Y3B3 224 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 HDGFL3Q9Y3E1 203 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 ZNF337Q9Y3M9 751 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 V9GYQ6 96 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 NF1P21359 2839 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 TCRBV3S1A0A5B6 114 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 ERICH4A6NGS2 130 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 C17orf51A8MQB3 221 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 AHRRA9YTQ3 701 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 ADAMDEC1O15204 470 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 OR2T1O43869 369 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 RBM34P42696 430 aaKnown RBP15.66■□□□□ 0.1
CPSF4-209ENST00000465132 B3GALT5-AS1P59052 145 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 CSNK2A1P68400 391 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-209ENST00000465132 HOXC5Q00444 222 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 TRAM2Q15035 370 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 ZFP1Q6P2D0 407 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 TTC33Q6PID6 262 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-209ENST00000465132 ZNF771Q7L3S4 317 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-209ENST00000465132 ATG4DQ86TL0 474 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-209ENST00000465132 OFCC1Q8IZS5 231 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 NINJ1Q92982 152 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 ZHX1-C8orf76Q96EF9 292 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 SLC41A3Q96GZ6 507 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 PIP5K1AQ99755 562 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 POTEKPQ9BYX7 375 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 AMBRA1Q9C0C7 1298 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 KLHL4Q9C0H6 718 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 CXXC4Q9H2H0 198 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 CTPS2Q9NRF8 586 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 OSGIN1Q9UJX0 560 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 SLC6A5Q9Y345 797 aa15.66■□□□□ 0.1
CPSF4-209ENST00000465132 A0A087WUJ7 227 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 TMEM229AB2RXF0 380 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 DNPH1O43598 174 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 ADAM11O75078 769 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 TFPIP10646 304 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 FCGR1AP12314 374 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 CD99P14209 185 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 TCEA1P23193 301 aaKnown RBP15.65■□□□□ 0.1
CPSF4-209ENST00000465132 HTR2AP28223 471 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 ACTR3P61158 418 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 CRYZQ08257 329 aaKnown RBP15.65■□□□□ 0.1
CPSF4-209ENST00000465132 MFSD13AQ14CX5 517 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 NPTX1Q15818 432 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 SYT14P1Q58G82 188 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 POMZP3Q6PJE2 187 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 SEM1Q6ZVN7 128 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 ADGRG3Q86Y34 549 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 CDK20Q8IZL9 346 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 LINC00471Q8N535 108 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 POC1BQ8TC44 478 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 STMN2Q93045 179 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 C7orf34Q96L11 122 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 KLHL15Q96M94 604 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 TIMP4Q99727 224 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 TMEM43Q9BTV4 400 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 POLDIP3Q9BY77 421 aaKnown RBP15.65■□□□□ 0.1
CPSF4-209ENST00000465132 PRDM14Q9GZV8 571 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 CCM2LQ9NUG4 571 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-209ENST00000465132 NDUFAF4Q9P032 175 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 TMCC3Q9ULS5 477 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 SLC7A7Q9UM01 511 aa15.65■□□□□ 0.1
CPSF4-209ENST00000465132 FAM221AA4D161 298 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 HSPB2A8KAH6 182 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 B4DXG7 233 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 H0Y3Z8 333 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 GNGT2O14610 69 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 SEMG1P04279 462 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 H1F0P07305 194 aaKnown RBP15.64■□□□□ 0.09
CPSF4-209ENST00000465132 ZNF708P17019 499 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 TNFRSF1BP20333 461 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 MAGEA2P43356 314 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 KIR2DL3P43628 341 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 LHX2P50458 406 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 ARHGDIAP52565 204 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms