RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 COX5AP20674 150 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 GCAP28676 217 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 GRIA1P42261 906 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 CASP4P49662 377 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 ASPHQ12797 758 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 C1orf61Q13536 156 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF79Q15937 498 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 DPYSL2Q16555 572 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 KRT71Q3SY84 523 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 UNQ9370/PRO34162Q6UXP9 181 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 VRK2Q86Y07 508 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 ITPRIPQ8IWB1 547 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 C11orf53Q8IXP5 236 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 DNAJA4Q8WW22 397 aaPredicted RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 PIBF1Q8WXW3 757 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 LZICQ8WZA0 190 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 OR1E3Q8WZA6 343 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 EFHD2Q96C19 240 aaPredicted RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 COQ2Q96H96 371 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 SEC22AQ96IW7 307 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 PGLYRP4Q96LB8 373 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 RPRD1AQ96P16 312 aaPredicted RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 RBM14Q96PK6 669 aaKnown RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 CCNL2Q96S94 520 aaPredicted RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 KLHDC3Q9BQ90 382 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 RHOXF2Q9BQY4 288 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 RAB34Q9BZG1 259 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 SLC7A5P2Q9GIP4 190 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 NSRP1Q9H0G5 558 aaKnown RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 MAGT1Q9H0U3 335 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 VCX2Q9H322 139 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 PTBP2Q9UKA9 531 aaKnown RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 PRPF19Q9UMS4 504 aaKnown RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 PRELID1Q9Y255 219 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 V9GYY5 206 aaPredicted RBP2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 TTC21BQ7Z4L5 1316 aa2.62□□□□□ -1.99
HMGXB4-205ENST00000464480 ROCK1Q13464 1354 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 IBTKQ9P2D0 1353 aaPredicted RBP2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 LRRK1Q38SD2 2015 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TRAV26-1A0A087WT03 109 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 SYNJ2BP-COX16A0A087WUM0 186 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 A0A1B0GUS0 222 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 IDSB3KWA1 339 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 RGS16O15492 202 aaPredicted RBP2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 CYTH3O43739 400 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 PFKFB2O60825 505 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 MMP23AO75900 390 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 DIRAS1O95057 198 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 SNAPINO95295 136 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 S100A6P06703 90 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 KRTAP1-4P0C5Y4 121 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 RBMY1CP0DJD4 496 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 POU2F1P14859 743 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 CALCRP30988 508 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 RFC4P35249 363 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 CEBPDP49716 269 aaPredicted RBP2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 PKNOX1P55347 436 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TIMM10P62072 90 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TPM4P67936 248 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 LRRC74AQ0VAA2 488 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ORC2Q13416 577 aaPredicted RBP2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 RABL6Q3YEC7 729 aaPredicted RBP2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 CENPPQ6IPU0 288 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ZSCAN25Q6NSZ9 544 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF544Q6NX49 715 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 KDELC1Q6UW63 502 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ANGPTL8Q6UXH0 198 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ACOT7LQ6ZUV0 252 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 OR2L13Q8N349 312 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 OR52I1Q8NGK6 324 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ST8SIA1Q92185 356 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF75CPQ92670 426 aaPredicted RBP2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 CDKL2Q92772 493 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 PPP1R14BQ96C90 147 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 SLC41A3Q96GZ6 507 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TECTBQ96PL2 329 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 CLCC1Q96S66 551 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TBX15Q96SF7 602 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 NPAS2Q99743 824 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TMEM43Q9BTV4 400 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 OSBPL10Q9BXB5 764 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TSGA10Q9BZW7 698 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 SELENOIQ9C0D9 397 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 LRRC40Q9H9A6 602 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 SH2D2AQ9NP31 389 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ADAM22Q9P0K1 906 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 IL17CQ9P0M4 197 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 CDH9Q9ULB4 789 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF256Q9Y2P7 627 aaPredicted RBP2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 POLDIP2Q9Y2S7 368 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 TMED5Q9Y3A6 229 aa2.61□□□□□ -1.99
HMGXB4-205ENST00000464480 IGHV3OR16-13A0A075B7E8 117 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 A8MU10 97 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 UGT1A9O60656 530 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 ATP5LO75964 103 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 ERLIN2O94905 339 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 ACTL6AO96019 429 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 TROVE2P10155 538 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 SFTPCP11686 197 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 RPS2P15880 293 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms