RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 HCRTR1O43613 425 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 PRKAB2O43741 272 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 UGT1A9O60656 530 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 MMP23AO75900 390 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 LGI1O95970 557 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 RBMY1CP0DJD4 496 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 ZNF19P17023 458 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 HTR1FP30939 366 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 CCR1P32246 355 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 MAGEA8P43361 318 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 TIMM10P62072 90 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 KLHL38Q2WGJ6 581 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 DMRTC1Q5HYR2 192 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 SAMD4BQ5PRF9 694 aaKnown RBP2.88□□□□□ -1.95
CLK1-208ENST00000464454 C1orf146Q5VVC0 180 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 OTPQ5XKR4 325 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 HSDL2Q6YN16 418 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 UTS2BQ765I0 119 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 TGIF2LYQ8IUE0 185 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 C7orf33Q8WU49 177 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 CHCHD10Q8WYQ3 142 aaPredicted RBP2.88□□□□□ -1.95
CLK1-208ENST00000464454 CXorf40BQ96DE9 158 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 PAGE5Q96GU1 130 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 ZNF414Q96IQ9 312 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 RNF2Q99496 336 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 COPS8Q99627 209 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 NARFLQ9H6Q4 476 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 SUDS3Q9H7L9 328 aaPredicted RBP2.88□□□□□ -1.95
CLK1-208ENST00000464454 YY1AP1Q9H869 796 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 FN3KRPQ9HA64 309 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 MCCC2Q9HCC0 563 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 ADAM28Q9UKQ2 775 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 NAP1L2Q9ULW6 460 aaPredicted RBP2.88□□□□□ -1.95
CLK1-208ENST00000464454 RPL36Q9Y3U8 105 aaKnown RBP2.88□□□□□ -1.95
CLK1-208ENST00000464454 V9GY05 133 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 A0A0J9YXY3 114 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 IQANK1A0A1B0GTG1 560 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 TCRBV9S1A1TA0A576 114 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 FAM231BA6NCW3 169 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 A8MXQ7 604 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 GOLGA8SH3BPF8 625 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 NBR2O15453 112 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 EMC8O43402 210 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 RAMP3O60896 148 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 B4GALT2O60909 372 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 STAMBPO95630 424 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 OPN1MWP04001 364 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 OPN1MW2P0DN77 364 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 OPN1MW3P0DN78 364 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 NCK1P16333 377 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 DDOSTP39656 456 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 QARSP47897 775 aaKnown RBP2.87□□□□□ -1.95
CLK1-208ENST00000464454 DUSP3P51452 185 aaPredicted RBP2.87□□□□□ -1.95
CLK1-208ENST00000464454 CRYBB1P53674 252 aaPredicted RBP2.87□□□□□ -1.95
CLK1-208ENST00000464454 APOC4P55056 127 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 TNFRSF17Q02223 184 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 ARFRP1Q13795 201 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 VGLL4Q14135 290 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 GRB7Q14451 532 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 OXA1LQ15070 435 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 ZMYND11Q15326 602 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 CCDC14Q49A88 953 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 PDZK1Q5T2W1 519 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 OR4K14Q8NGD5 310 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 MAGEE2Q8TD90 523 aaPredicted RBP2.87□□□□□ -1.95
CLK1-208ENST00000464454 BRSK1Q8TDC3 778 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 FRAT1Q92837 279 aaPredicted RBP2.87□□□□□ -1.95
CLK1-208ENST00000464454 C10orf35Q96D05 121 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 TIMD4Q96H15 378 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 IMMP1LQ96LU5 166 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 OR51J1Q9H342 316 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 RBKSQ9H477 322 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 BFARQ9NZS9 450 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 KIF25Q9UIL4 384 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 STAP1Q9ULZ2 295 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 TMCO1Q9UM00 188 aa2.87□□□□□ -1.95
CLK1-208ENST00000464454 IGHV3OR16-13A0A075B7E8 117 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 IGKV1D-8A0A087WSZ0 117 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 IGHV1OR21-1A0A087WYE8 117 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 FAM240BA0A1B0GVZ2 78 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 A0A1W2PNU3 283 aaPredicted RBP2.86□□□□□ -1.95
CLK1-208ENST00000464454 SNTNA6NMZ2 147 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 TIMM8AO60220 97 aaPredicted RBP2.86□□□□□ -1.95
CLK1-208ENST00000464454 FCMRO60667 390 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 ZNF780AO75290 641 aaPredicted RBP2.86□□□□□ -1.95
CLK1-208ENST00000464454 CLDN9O95484 217 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 ACTL6AO96019 429 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 IGLV1-47P01700 117 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 IGHDP01880 384 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 ATP6V1B2P21281 511 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 COX7A1P24310 79 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 IL12AP29459 219 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 SHMT2P34897 504 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 RDXP35241 583 aaKnown RBP2.86□□□□□ -1.95
CLK1-208ENST00000464454 KIR2DS4P43632 304 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 HLCSP50747 726 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 GPM6AP51674 278 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 SELENOTP62341 195 aa2.86□□□□□ -1.95
CLK1-208ENST00000464454 TLE4Q04727 773 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms