RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TECPR1Q7Z6L1 1165 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 TMEM17Q86X19 198 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 FAM26EQ8N5C1 309 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 OR7G1Q8NGA0 311 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 NKX3-1Q99801 234 aaPredicted RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 CTRCQ99895 268 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 UQCC2Q9BRT2 126 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SGPP1Q9BX95 441 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 GON7Q9BXV9 100 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SAV1Q9H4B6 383 aaPredicted RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 QPCTLQ9NXS2 382 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 H7C2Y5 167 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 SELENOFO60613 162 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 PRAMEF2O60811 474 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 SCO1O75880 301 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 FARS2O95363 451 aaKnown RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 KNG1P01042 644 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 UGT2B7P16662 529 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 POU3F4P49335 361 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 DGCR2P98153 550 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 TNFRSF17Q02223 184 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 NDUFAF7Q7L592 441 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 PDZD9Q8IXQ8 264 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 LAS2Q8IYD9 372 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 BRIX1Q8TDN6 353 aaKnown RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 OR1E3Q8WZA6 343 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ZNF775Q96BV0 537 aaPredicted RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 OR1F2PQ96R84 312 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 TEAD3Q99594 435 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 DOK1Q99704 481 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 DHCR7Q9UBM7 475 aaKnown RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 RPH3AQ9Y2J0 694 aaPredicted RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 EP300Q09472 2414 aaPredicted RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 SCN2AQ99250 2005 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 TRDV1A0A1B0GX56 115 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 C2orf72A6NCS6 295 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 HTR1FP30939 366 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 CXADRP78310 365 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 KIR2DS3Q14952 304 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 AGERQ15109 404 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 METTL11BQ5VVY1 283 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 KIAA1211LQ6NV74 962 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 HAGHLQ6PII5 290 aaPredicted RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 TMEM205Q6UW68 189 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 RDH10Q8IZV5 341 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 GPR32P1Q8NGA4 272 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 TBC1D20Q96BZ9 403 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 DDOQ99489 341 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ALG12Q9BV10 488 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 VN1R3Q9BXE9 311 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 INIPQ9NRY2 104 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 CCL27Q9Y4X3 112 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 A3GALT2U3KPV4 340 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 TMEM221A6NGB7 291 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 SLC33A1O00400 549 aaPredicted RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 DSCR3O14972 297 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 PTHLHP12272 177 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 PGCP20142 388 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ZNF41P51814 821 aaPredicted RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 KIAA1024LP59773 190 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 TRA2BP62995 288 aaKnown RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 SSX1Q16384 188 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 VASNQ6EMK4 673 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 C3P1Q6ZMU1 363 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ZNF836Q6ZNA1 936 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 KANSL1Q7Z3B3 1105 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 KCTD20Q7Z5Y7 419 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 FAM109AQ8N4B1 249 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ACBD4Q8NC06 268 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 OR51D1Q8NGF3 324 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 APH1BQ8WW43 257 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 DAZLQ92904 295 aaKnown RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 KLHL15Q96M94 604 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 HHIPQ96QV1 700 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 NKX2-4Q9H2Z4 354 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ELOVL3Q9HB03 270 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 MAN2C1Q9NTJ4 1040 aa8.41□□□□□ -1.06
HPS4-208ENST00000464362 ING1Q9UK53 422 aaPredicted RBP8.41□□□□□ -1.06
HPS4-208ENST00000464362 HEXBP07686 556 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 NAT2P11245 290 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 RORAP35398 523 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 OPRD1P41143 372 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 KIR2DL3P43628 341 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 CLRN1P58418 232 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 EIF2B1Q14232 305 aaKnown RBP8.4□□□□□ -1.06
HPS4-208ENST00000464362 ELOCQ15369 112 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.4□□□□□ -1.06
HPS4-208ENST00000464362 MAMDC2Q7Z304 686 aaPredicted RBP8.4□□□□□ -1.06
HPS4-208ENST00000464362 GKN2Q86XP6 184 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 SFTPA1Q8IWL2 248 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 TEX19Q8NA77 164 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 TOE1Q96GM8 510 aaKnown RBP8.4□□□□□ -1.06
HPS4-208ENST00000464362 SDF2Q99470 211 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 OR52A5Q9H2C5 316 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 VSX1Q9NZR4 365 aaPredicted RBP8.4□□□□□ -1.06
HPS4-208ENST00000464362 GMEB2Q9UKD1 530 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 CA14Q9ULX7 337 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 FLVCR2Q9UPI3 526 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 SLC6A5Q9Y345 797 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms