RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MECRQ9BV79 373 aa15.07■□□□□ 0
HMGN1-210ENST00000464078 CA10Q9NS85 328 aa15.07■□□□□ 0
HMGN1-210ENST00000464078 NOP53Q9NZM5 478 aaKnown RBP15.07■□□□□ 0
HMGN1-210ENST00000464078 MEGF8Q7Z7M0 2845 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 TMED7-TICAM2A0A0A6YYA0 188 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 B9A039 149 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 SKAP2O75563 359 aaPredicted RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 TGFAP01135 160 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 OR12D1P0DN82 309 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 GIFP27352 417 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 SERPINF1P36955 418 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 IDH2P48735 452 aaKnown RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 PPOXP50336 477 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 POLR2HP52434 150 aaKnown RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 EMX2Q04743 252 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 HIKESHIQ53FT3 197 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 SLC46A3Q7Z3Q1 461 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 ABHD12BQ7Z5M8 362 aaPredicted RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 GSPT2Q8IYD1 628 aaKnown RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 ZIC4Q8N9L1 334 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 XAGE5Q8WWM1 108 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 C3orf49Q96BT1 292 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 TUBGCP3Q96CW5 907 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 ZG16BQ96DA0 208 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 ZIM3Q96PE6 472 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 ZNF317Q96PQ6 595 aaPredicted RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 KATNB1Q9BVA0 655 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 SF3B5Q9BWJ5 86 aaKnown RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 OSGIN1Q9UJX0 560 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 FBXO9Q9UK97 447 aaPredicted RBP15.06■□□□□ 0
HMGN1-210ENST00000464078 TMED7Q9Y3B3 224 aa15.06■□□□□ 0
HMGN1-210ENST00000464078 IGHV1-18A0A0C4DH31 117 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 TMEM72A0PK05 275 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 CLDN24A6NM45 220 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 AP3D1O14617 1153 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 SCN2BO60939 215 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 UQCRC2P22695 453 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 SLC1A3P43003 542 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 KHKP50053 298 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 HPCAP84074 193 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 ADIPOQQ15848 244 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 ZSWIM7Q19AV6 140 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 CR1LQ2VPA4 569 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 C3orf36Q3SXR2 165 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 SAXO2Q658L1 398 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 TNFAIP8L2Q6P589 184 aaPredicted RBP15.05■□□□□ -0
HMGN1-210ENST00000464078 ZCCHC23Q6ZST2 131 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 MEX3DQ86XN8 651 aaKnown RBP15.05■□□□□ -0
HMGN1-210ENST00000464078 ANKS4BQ8N8V4 417 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 OR9K2Q8NGE7 335 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 OR4A15Q8NGL6 344 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 UBLCP1Q8WVY7 318 aaPredicted RBP15.05■□□□□ -0
HMGN1-210ENST00000464078 CNOT9Q92600 299 aaKnown RBP15.05■□□□□ -0
HMGN1-210ENST00000464078 RAB8BQ92930 207 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 NEURL3Q96EH8 262 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 SLC38A2Q96QD8 506 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 BPESC1Q9GZL8 116 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 PLK3Q9H4B4 646 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 MOV10Q9HCE1 1003 aaKnown RBP15.05■□□□□ -0
HMGN1-210ENST00000464078 ZDHHC2Q9UIJ5 367 aa15.05■□□□□ -0
HMGN1-210ENST00000464078 ZC3H12DA2A288 527 aaKnown RBP15.04■□□□□ -0
HMGN1-210ENST00000464078 CRYAAP02489 173 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 CCNA2P20248 432 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 TACR3P29371 465 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 TBRG1Q3YBR2 411 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 OTUD3Q5T2D3 398 aaPredicted RBP15.04■□□□□ -0
HMGN1-210ENST00000464078 AAED1Q7RTV5 226 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 HPS1Q92902 700 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 ZNF385AQ96PM9 386 aaKnown RBP15.04■□□□□ -0
HMGN1-210ENST00000464078 VRK1Q99986 396 aaPredicted RBP15.04■□□□□ -0
HMGN1-210ENST00000464078 KCNS3Q9BQ31 491 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 RHOXF2Q9BQY4 288 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 SOX7Q9BT81 388 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 SLC17A7Q9P2U7 560 aa15.04■□□□□ -0
HMGN1-210ENST00000464078 CRNNQ9UBG3 495 aaPredicted RBP15.04■□□□□ -0
HMGN1-210ENST00000464078 ARPC4-TTLL3A0A0A6YYG9 625 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 PRSS51A0A1B0GVH4 220 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 PRAMEF27A3QJZ7 478 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 AGAP5A6NIR3 686 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 LIPT2A6NK58 231 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 AQP7P3A6NL99 342 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 KLF11O14901 512 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 TCF21O43680 179 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 GPIP06744 558 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 TACSTD2P09758 323 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 NUDT17P0C025 328 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 OR4A8P0C604 315 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 UQCRBP14927 111 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 IDH3GP51553 393 aaPredicted RBP15.03■□□□□ -0
HMGN1-210ENST00000464078 CARTPTQ16568 116 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 IQCCQ4KMZ1 466 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 FAM169BQ8N8A8 192 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 OR1K1Q8NGR3 316 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 TESCQ96BS2 214 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 TRNT1Q96Q11 434 aaKnown RBP15.03■□□□□ -0
HMGN1-210ENST00000464078 TMEM45AQ9NWC5 275 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 PRDM4Q9UKN5 801 aa15.03■□□□□ -0
HMGN1-210ENST00000464078 OR6C65A6NJZ3 312 aa15.02■□□□□ -0
HMGN1-210ENST00000464078 ZNF587BE7ETH6 402 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms