RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 AGAP6Q5VW22 663 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 NXNQ6DKJ4 435 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 DNM1P46Q6ZS02 220 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 C17orf78Q8N4C9 275 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 PNPT1Q8TCS8 783 aaKnown RBP12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 TMEM45BQ96B21 275 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 ITCHQ96J02 903 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 SLCO5A1Q9H2Y9 848 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 RMND5AQ9H871 391 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 MANSC1Q9H8J5 431 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 ABCA1O95477 2261 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 KLF11O14901 512 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 IGHV4-39P01824 125 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 ITGA5P08648 1049 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 TFPTP0C1Z6 253 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 KITP10721 976 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 CXCR1P25024 350 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 CD40P25942 277 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 CDKN1AP38936 164 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 CRISP3P54108 245 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 FAPQ12884 760 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 NRF1Q16656 503 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 RNF220Q5VTB9 566 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 WBP2NLQ6ICG8 309 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 CASP12Q6UXS9 341 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 OR52N5Q8NH56 324 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 OR52P1PQ8NH57 321 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 MGARPQ8TDB4 240 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 SLC38A5Q8WUX1 472 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 DNAJA3Q96EY1 480 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 TPT1P8Q9HAU6 139 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 SLC6A13Q9NSD5 602 aa12.63□□□□□ -0.39
SNRNP40-203ENST00000463988 ALPK2Q86TB3 2170 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 A0A0G2JPF8 293 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 LIPT2A6NK58 231 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 HNRNPCL2B2RXH8 293 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 HNRNPCL3B7ZW38 293 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 INAFM1C9JVW0 142 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 RNF223E7ERA6 249 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 UBDO15205 165 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ANP32DO95626 131 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 GPIP06744 558 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 HNRNPCL4P0DMR1 293 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ETFAP13804 333 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 TTKP33981 857 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ACAA2P42765 397 aaKnown RBP12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 CRATP43155 626 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ZNF83P51522 516 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 DSTNP60981 165 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 MAGOHP61326 146 aaKnown RBP12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 COPZ1P61923 177 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 KRTAP1-1Q07627 177 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 LARS2Q15031 903 aaKnown RBP12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 SLC9B1Q4ZJI4 515 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 OTUD3Q5T2D3 398 aaPredicted RBP12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ZNF836Q6ZNA1 936 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 DEPDC4Q8N2C3 294 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 WDR31Q8NA23 367 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ZBTB9Q96C00 473 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 TLCD1Q96CP7 247 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 HS6ST2Q96MM7 605 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 DHRS9Q9BPW9 319 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ARMC7Q9H6L4 198 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 RLIMQ9NVW2 624 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 UPB1Q9UBR1 384 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 ZNF232Q9UNY5 417 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 AMDHD2Q9Y303 409 aa12.62□□□□□ -0.39
SNRNP40-203ENST00000463988 DNHD1Q96M86 4753 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 A0A096LPI6 279 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 TMEM247A6NEH6 219 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 AQP7P3A6NL99 342 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 A8MVM7 634 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 E7EQL1 145 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 VAMP5O95183 116 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 GKN3PP0CG01 181 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 MPGP29372 298 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 ACVR1BP36896 505 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 POLR2JP52435 117 aaKnown RBP12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 CEACAM7Q14002 265 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 TSPO2Q5TGU0 170 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 PRAMEF8Q5VWM4 474 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 PRAMEF7Q5VXH5 474 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 C11orf71Q6IPW1 123 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 ZNF544Q6NX49 715 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 SLC22A25Q6T423 547 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 MAVSQ7Z434 540 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 PRIMA1Q86XR5 153 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 VRK2Q86Y07 508 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 MIER2Q8N344 545 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 TMEM99Q8N816 258 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 ZIC4Q8N9L1 334 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms