RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TGM3Q08188 693 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 DAG1Q14118 895 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 HEPACAMQ14CZ8 416 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TWIST1Q15672 202 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZSCAN26Q16670 478 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SFT2D3Q587I9 215 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 RUNDC3AQ59EK9 446 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 C6orf10Q5SRN2 563 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SAXO2Q658L1 398 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NANOGP8Q6NSW7 305 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 H3F3CQ6NXT2 135 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM205Q6UW68 189 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM64Q6YI46 380 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 QSOX2Q6ZRP7 698 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 Q71RC1 249 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ASRGL1Q7L266 308 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 COMTD1Q86VU5 262 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 RNF130Q86XS8 419 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PTOV1Q86YD1 416 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF595Q8IYB9 648 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MARVELD2Q8N4S9 558 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 DPP10Q8N608 796 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 HORMAD2Q8N7B1 307 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF615Q8N8J6 731 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PLPP5Q8NEB5 264 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR4N2Q8NGD1 307 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR4K14Q8NGD5 310 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR4A15Q8NGL6 344 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PSMA8Q8TAA3 256 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF721Q8TF20 911 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZFP90Q8TF47 636 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ASB5Q8WWX0 329 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 RAB8BQ92930 207 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MAL2Q969L2 176 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 LRRC58Q96CX6 371 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ELP4Q96EB1 424 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NSL1Q96IY1 281 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 IMMP1LQ96LU5 166 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CGREF1Q99674 301 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CENPKQ9BS16 269 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CRB3Q9BUF7 120 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NANOGQ9H9S0 305 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CXorf21Q9HAI6 301 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF160Q9HCG1 818 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MKKSQ9NPJ1 570 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 EQTNQ9NQ60 294 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PNO1Q9NRX1 252 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 FAM120CQ9NX05 1096 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 FLRT3Q9NZU0 649 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF282Q9UDV7 671 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF639Q9UID6 485 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 BTNL2Q9UIR0 455 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ERVK-19Q9WJR5 959 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NDUFAF1Q9Y375 327 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 RTTNQ86VV8 2226 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CCDC88CQ9P219 2028 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 FLNAP21333 2647 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 LOC102723996A0A087X1L8 192 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 A0A096LPI6 279 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 IGHV1-45A0A0A0MS14 117 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 RNF103-CHMP3A0A140T963 221 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PRSS51A0A1B0GVH4 220 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 C17orf105B2RV13 164 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 NPIPA5E9PKD4 350 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 RFXANKO14593 260 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ANGPT2O15123 496 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CFLARO15519 480 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 BCAS1O75363 584 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 NDUFB8O95169 186 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 LY6G6DO95868 133 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 IGKV1D-16P01601 117 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ATP1B1P05026 303 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 HMGN2P05204 90 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 IL6P05231 212 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 KRT16P08779 473 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 FGF2P09038 288 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 SLC35E2P0CK97 266 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ICAM2P13598 275 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 NCK1P16333 377 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PORP16435 677 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CSNK2A2P19784 350 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ATP6V1B2P21281 511 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CALB2P22676 271 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 DNASE1P24855 282 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 MAP3K8P41279 467 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 EMDP50402 254 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CLNS1AP54105 237 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 EMP2P54851 167 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 DLX5P56178 289 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 HSD17B7P56937 341 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PSME3P61289 254 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 MS4A2Q01362 244 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PMP22Q01453 160 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 LASP1Q14847 261 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 NSDHLQ15738 373 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 MAPKAPK3Q16644 382 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 DUSP5Q16690 384 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms