RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TESQ9UGI8 421 aaKnown RBP15.75■□□□□ 0.11
VPS52-214ENST00000463486 AP3M1Q9Y2T2 418 aa15.75■□□□□ 0.11
VPS52-214ENST00000463486 FREM1Q5H8C1 2179 aa15.75■□□□□ 0.11
VPS52-214ENST00000463486 CSMD2Q7Z408 3487 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 MPDZO75970 2070 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 IGKV3D-15A0A087WSY6 115 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 A0A0B4J2E0 115 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 A0A1B0GX12 115 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 LIPT2A6NK58 231 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 FTCDNL1E5RQL4 147 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 DCTN3O75935 186 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 YES1P07947 543 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 NTF4P34130 210 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 CPA2P48052 419 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 PDK3Q15120 406 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 OR1Q1Q15612 314 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 CCDC103Q8IW40 242 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 MCEMP1Q8IX19 187 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 STK35Q8TDR2 534 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 SLC38A4Q969I6 547 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 PTDSS2Q9BVG9 487 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 PCDHAC1Q9H158 963 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 KLHL28Q9NXS3 571 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 EMC9Q9Y3B6 208 aa15.74■□□□□ 0.11
VPS52-214ENST00000463486 SMNDC1O75940 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
VPS52-214ENST00000463486 PLGP00747 810 aaPredicted RBP15.73■□□□□ 0.11
VPS52-214ENST00000463486 FPR1P21462 350 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 EDNRAP25101 427 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 P2RY4P51582 365 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 OR2B6P58173 313 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 SORDQ00796 357 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 FAM27E3Q08E93 113 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 RASGEF1BQ0VAM2 473 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 GKAP1Q5VSY0 366 aaPredicted RBP15.73■□□□□ 0.11
VPS52-214ENST00000463486 C1orf140Q5VVS0 124 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 ULK3Q6PHR2 472 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 LINC00114Q6XXX2 140 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 DNAJA4Q8WW22 397 aaPredicted RBP15.73■□□□□ 0.11
VPS52-214ENST00000463486 KTI12Q96EK9 354 aaPredicted RBP15.73■□□□□ 0.11
VPS52-214ENST00000463486 ZNF300Q96RE9 604 aaPredicted RBP15.73■□□□□ 0.11
VPS52-214ENST00000463486 TAGLN3Q9UI15 199 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 PROCRQ9UNN8 238 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 SPG11Q96JI7 2443 aa15.73■□□□□ 0.11
VPS52-214ENST00000463486 A0A087WUJ7 227 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 ZNF724A8MTY0 619 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 CCKARP32238 428 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 IDUAP35475 653 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 SLC16A1P53985 500 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 CDH12P55289 794 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 CTBP2P56545 445 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 SLC35A1P78382 337 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 CEACAM7Q14002 265 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 KRT72Q14CN4 511 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 CYBRD1Q53TN4 286 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 ALG10BQ5I7T1 473 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 RASSF5Q8WWW0 418 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 ZNF775Q96BV0 537 aaPredicted RBP15.72■□□□□ 0.11
VPS52-214ENST00000463486 C14orf79Q96F83 325 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 MCHR1Q99705 422 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 ALG2Q9H553 416 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 KLHL9Q9P2J3 617 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 KCNN3Q9UGI6 736 aa15.72■□□□□ 0.11
VPS52-214ENST00000463486 EIF1BO60739 113 aaKnown RBP15.71■□□□□ 0.11
VPS52-214ENST00000463486 T-ENOLP0DO92 83 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 PNMTP11086 282 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 TNFRSF1BP20333 461 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 CD79BP40259 229 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 FXNQ16595 210 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 SWT1Q5T5J6 900 aaKnown RBP15.71■□□□□ 0.11
VPS52-214ENST00000463486 ZNF613Q6PF04 617 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 PAQR6Q6TCH4 344 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 TFAP2EQ6VUC0 442 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 WDR88Q6ZMY6 472 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 C22orf34Q6ZV56 151 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 RANBP3LQ86VV4 465 aaPredicted RBP15.71■□□□□ 0.11
VPS52-214ENST00000463486 KIF18BQ86Y91 864 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 TMEM99Q8N816 258 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 CCDC197Q8NCU1 140 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 TAAR8Q969N4 342 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 SLC47A1Q96FL8 570 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 TMEM27Q9HBJ8 222 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 ELOVL5Q9NYP7 299 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 CRIM1Q9NZV1 1036 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 RPS6KB2Q9UBS0 482 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 SLC13A4Q9UKG4 626 aa15.71■□□□□ 0.11
VPS52-214ENST00000463486 ABCA4P78363 2273 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 FAM221AA4D161 298 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 ELOA3DA6NLF2 546 aaPredicted RBP15.7■□□□□ 0.1
VPS52-214ENST00000463486 CXCR6O00574 342 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 GPIP06744 558 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 CPOXP36551 454 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 KIR2DL3P43628 341 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 SELENOWP63302 87 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 SLC25A3Q00325 362 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 SLC17A1Q14916 467 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 OR7A5Q15622 319 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 ELOA3BQ3SY89 546 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 ENTPD8Q5MY95 495 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 TMEM201Q5SNT2 666 aa15.7■□□□□ 0.1
VPS52-214ENST00000463486 CARM1Q86X55 608 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms