RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SCAIQ8N9R8 606 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 LSM14AQ8ND56 463 aaKnown RBP9.63□□□□□ -0.87
RTF1-202ENST00000462276 MAGEE2Q8TD90 523 aaPredicted RBP9.63□□□□□ -0.87
RTF1-202ENST00000462276 HIST1H2ACQ93077 130 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 MIB2Q96AX9 1013 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 KLHL15Q96M94 604 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 TAPBPLQ9BX59 468 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 LDAHQ9H6V9 325 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 MEPEQ9NQ76 525 aaPredicted RBP9.63□□□□□ -0.87
RTF1-202ENST00000462276 ZNF71Q9NQZ8 489 aaPredicted RBP9.63□□□□□ -0.87
RTF1-202ENST00000462276 NANSQ9NR45 359 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 PAPOLBQ9NRJ5 636 aaKnown RBP9.63□□□□□ -0.87
RTF1-202ENST00000462276 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 ZNF229Q9UJW7 825 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 LHX6Q9UPM6 363 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 RPH3AQ9Y2J0 694 aaPredicted RBP9.63□□□□□ -0.87
RTF1-202ENST00000462276 ZNF337Q9Y3M9 751 aa9.63□□□□□ -0.87
RTF1-202ENST00000462276 TLN1Q9Y490 2541 aaKnown RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 SMG1Q96Q15 3661 aaKnown RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 ENO4A6NNW6 628 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 SOCS2O14508 198 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 AQP7O14520 342 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 EFNA2O43921 213 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 OR7A10O76100 309 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 PMS2P2O95744 297 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 SAGP10523 405 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 OSMP13725 252 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 CPN1P15169 458 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 FUT1P19526 365 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 POU3F2P20265 443 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 DAPP51397 102 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 RPS6KA3P51812 740 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 PRPS1P60891 318 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 RPS3AP61247 264 aaKnown RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 SLC35A1P78382 337 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 SF3B4Q15427 424 aaKnown RBP eCLIP9.62□□□□□ -0.87
RTF1-202ENST00000462276 LRRC36Q1X8D7 754 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 TMEM176BQ3YBM2 270 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 CMPK2Q5EBM0 449 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 RNFT1Q5M7Z0 435 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 WIPI1Q5MNZ9 446 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 VASNQ6EMK4 673 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 ARHGAP11AQ6P4F7 1023 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 POMZP3Q6PJE2 187 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 OAFQ86UD1 273 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 SIAH3Q8IW03 269 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 HS3ST5Q8IZT8 346 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 C10orf53Q8N6V4 93 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 ADPRHL1Q8NDY3 354 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 OR9Q2Q8NGE9 314 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 NRG4Q8WWG1 115 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 OSTF1Q92882 214 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 TAAR8Q969N4 342 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 SARAFQ96BY9 339 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 ZHX1-C8orf76Q96EF9 292 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 KTI12Q96EK9 354 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 TAAR6Q96RI8 345 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 BARD1Q99728 777 aaKnown RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 SLC29A1Q99808 456 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 ASPNQ9BXN1 380 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 TEX12Q9BXU0 123 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 KRT84Q9NSB2 600 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 SMPD3Q9NY59 655 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 MRPL39Q9NYK5 338 aaKnown RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 B3GALT5Q9Y2C3 310 aa9.62□□□□□ -0.87
RTF1-202ENST00000462276 MAGED1Q9Y5V3 778 aaPredicted RBP9.62□□□□□ -0.87
RTF1-202ENST00000462276 NBEAQ8NFP9 2946 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 NINQ8N4C6 2090 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 LOC102725191A0A1B0GVB3 256 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 UNC119BA6NIH7 251 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 LIPT2A6NK58 231 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 SEC14L5O43304 696 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 VAMP5O95183 116 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 CH25HO95992 272 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 ASAH2BP0C7U1 165 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 ZNF708P17019 499 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 BMP7P18075 431 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 CCNA2P20248 432 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 FUT4P22083 530 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 GTF2E2P29084 291 aaKnown RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 RFC3P40938 356 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 AGFG1P52594 562 aaKnown RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 CARD18P57730 90 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 RAC3P60763 192 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 MYBPHQ13203 477 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 LAPTM4AQ15012 233 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 ZNF239Q16600 458 aaKnown RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 ZBED5Q49AG3 693 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 TTC23Q5W5X9 447 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 H1FNTQ75WM6 255 aaPredicted RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 PM20D2Q8IYS1 436 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 EXD3Q8N9H8 876 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 PFN4Q8NHR9 129 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 GTPBP3Q969Y2 492 aaKnown RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 FAM46AQ96IP4 442 aaKnown RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 OR5B2Q96R09 309 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms