RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 HAUS1Q96CS2 278 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 VMP1Q96GC9 406 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CAPZA3Q96KX2 299 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 PRAP1Q96NZ9 151 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 PPP1R2P1Q96PQ5 205 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 PANX3Q96QZ0 392 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ABHD1Q96SE0 405 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 EBNA1BP2Q99848 306 aaKnown RBP4.23□□□□□ -1.73
COPS3-204ENST00000462236 C19orf24Q9BVV8 132 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CCDC106Q9BWC9 280 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 TSSK1BQ9BXA7 367 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 KLHL4Q9C0H6 718 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 AICDAQ9GZX7 198 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CSTL1Q9H114 145 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CALHM2Q9HA72 323 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ZNF556Q9HAH1 456 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ABCF3Q9NUQ8 709 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 GRIP1Q9Y3R0 1128 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 MMACHCQ9Y4U1 282 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 DOCK11Q5JSL3 2073 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ATP6AP2A0A1C7CYW4 349 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ZNF860A6NHJ4 632 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 A8MXE2 369 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 PRR32B1ATL7 298 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 C4orf51C9J302 202 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 G3V3Y1 287 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 TMEM178BH3BS89 294 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 H7C0C1 242 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 TO15178 435 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ATP6AP2O75787 350 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ZFAND5O76080 213 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 TFAP2AP05549 437 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 F7P08709 466 aaPredicted RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 SLCO1A2P46721 670 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 CAPZA2P47755 286 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ATP5OP48047 213 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 MARCKSL1P49006 195 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 HADHBP55084 474 aaKnown RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 CD81P60033 236 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 HNRNPA0Q13151 305 aaKnown RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 PRPSAP1Q14558 356 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 KCNJ11Q14654 390 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 SIX1Q15475 284 aaPredicted RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 SNAPC1Q16533 368 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 PARP6Q2NL67 630 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ZNF791Q3KP31 576 aaPredicted RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 CHRFAM7AQ494W8 412 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ACSBG2Q5FVE4 666 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 PDSS1Q5T2R2 415 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 CAPN13Q6MZZ7 669 aaPredicted RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 NIPAL1Q6NVV3 410 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 PLXDC2Q6UX71 529 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 CYHR1Q6ZMK1 362 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 OTOAQ7RTW8 1153 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 ASPGQ86U10 573 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 LRRC6Q86X45 466 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 GBGT1Q8N5D6 347 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 MFSD9Q8NBP5 474 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 POC1AQ8NBT0 407 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 MAPK1IP1LQ8NDC0 245 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 OR4K1Q8NGD4 311 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 OR8K3Q8NH51 312 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 WDR20Q8TBZ3 569 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 NT5CQ8TCD5 201 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 PAQR8Q8TEZ7 354 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 SLC13A3Q8WWT9 602 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 CTNNBL1Q8WYA6 563 aaPredicted RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 MTERF3Q96E29 417 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 SPACA9Q96E40 222 aaPredicted RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 FOPNLQ96NB1 174 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 PANX2Q96RD6 677 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 RBM24Q9BX46 236 aaKnown RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 REG4Q9BYZ8 158 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 UBQLN3Q9H347 655 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 RABEP2Q9H5N1 569 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 LRRC40Q9H9A6 602 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 LIN28AQ9H9Z2 209 aaKnown RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 TREX1Q9NSU2 369 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 GALPQ9UBC7 116 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 FBXW2Q9UKT8 454 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 EIF3LQ9Y262 564 aaKnown RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 HYOU1Q9Y4L1 999 aa4.22□□□□□ -1.73
COPS3-204ENST00000462236 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
COPS3-204ENST00000462236 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 A0A1W2PPI3 338 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 ELOVL7A1L3X0 281 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 CTAGE15A4D2H0 777 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 A8MUA0 341 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 UBE2CO00762 179 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 SPRY1O43609 319 aaPredicted RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 B4GALT2O60909 372 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 TRIM3O75382 744 aaPredicted RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 TNFSF13O75888 250 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 MYO1DO94832 1006 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 RCBTB2O95199 551 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 IGHV4-39P01824 125 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 C1QAP02745 245 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 GYPCP04921 128 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms