RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 SF3B4Q15427 424 aaKnown RBP eCLIP12.37□□□□□ -0.432e-21■■□□□ 12.4
CHRD-209ENST00000461120 ACSF3Q4G176 576 aaPredicted RBP12.37□□□□□ -0.43
CHRD-209ENST00000461120 FAM98BQ52LJ0 330 aaKnown RBP12.37□□□□□ -0.43
CHRD-209ENST00000461120 PDSS1Q5T2R2 415 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 C1orf146Q5VVC0 180 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 HBMQ6B0K9 141 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 RTL6Q6ICC9 239 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 LINC00114Q6XXX2 140 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 C3P1Q6ZMU1 363 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 WDR88Q6ZMY6 472 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 ADGRE4PQ86SQ3 457 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 CYP4Z1Q86W10 505 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 SPATA24Q86W54 205 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 ZDHHC21Q8IVQ6 265 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 ADGRG5Q8IZF4 528 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 OFCC1Q8IZS5 231 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 OR10D3Q8NH80 312 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 MPP4Q96JB8 637 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 ARL5BQ96KC2 179 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 OR5B2Q96R09 309 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 ZNF300Q96RE9 604 aaPredicted RBP12.37□□□□□ -0.43
CHRD-209ENST00000461120 PRSS27Q9BQR3 290 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 POTEKPQ9BYX7 375 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 MAGIXQ9H6Y5 334 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 HDGFL3Q9Y3E1 203 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 FAM215AQ9Y5M1 114 aa12.37□□□□□ -0.43
CHRD-209ENST00000461120 DHRS12A0PJE2 317 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 CLCA1A8K7I4 914 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 KDM4EB2RXH2 506 aaPredicted RBP12.36□□□□□ -0.43
CHRD-209ENST00000461120 CXCL13O43927 109 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 DIRAS1O95057 198 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 GPIP06744 558 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 ITGA2P17301 1181 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 HOXB4P17483 251 aaPredicted RBP12.36□□□□□ -0.43
CHRD-209ENST00000461120 RHCEP18577 417 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 FUT4P22083 530 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 IFNA8P32881 189 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 MAGEA2P43356 314 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 CARD18P57730 90 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 EGR4Q05215 589 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 ST3GAL3Q11203 375 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 MYBPHQ13203 477 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 C1orf185Q5T7R7 199 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 C1orf140Q5VVS0 124 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 SPNS3Q6ZMD2 512 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 TMPPEQ6ZT21 453 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 CHMP1BQ7LBR1 199 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 PIWIL3Q7Z3Z3 882 aaKnown RBP12.36□□□□□ -0.43
CHRD-209ENST00000461120 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 PIK3C3Q8NEB9 887 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 CANT1Q8WVQ1 401 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 OSTF1Q92882 214 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 ZNF845Q96IR2 970 aaPredicted RBP12.36□□□□□ -0.43
CHRD-209ENST00000461120 TMEM43Q9BTV4 400 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 FNDC11Q9BVV2 318 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 RHCGQ9UBD6 479 aa12.36□□□□□ -0.43
CHRD-209ENST00000461120 FAM32AQ9Y421 112 aaKnown RBP12.36□□□□□ -0.43
CHRD-209ENST00000461120 E9PLN8 166 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 SULT2B1O00204 365 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 AHSA1O95433 338 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 PMS2P2O95744 297 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 RAP2AP10114 183 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 IMPDH2P12268 514 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 NQO1P15559 274 aaKnown RBP12.35□□□□□ -0.43
CHRD-209ENST00000461120 PTNP21246 168 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 IDUAP35475 653 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 DIO1P49895 249 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 ERFP50548 548 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 CCNIQ14094 377 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 SGCBQ16585 318 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 NSUN5P2Q63ZY6 315 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 C5orf46Q6UWT4 87 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 RPTNQ6XPR3 784 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 B3GNT6Q6ZMB0 384 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 P3H2Q8IVL5 708 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 DNAJA3Q96EY1 480 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 RAB3IPQ96QF0 476 aaPredicted RBP12.35□□□□□ -0.43
CHRD-209ENST00000461120 UCN2Q96RP3 112 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 TRIB1Q96RU8 372 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 DMRTA2Q96SC8 542 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 PIP5K1AQ99755 562 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 VKORC1Q9BQB6 163 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 CALHM2Q9HA72 323 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 NMNAT1Q9HAN9 279 aaPredicted RBP12.35□□□□□ -0.43
CHRD-209ENST00000461120 TIGARQ9NQ88 270 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 MAN2C1Q9NTJ4 1040 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 PAQR5Q9NXK6 330 aaPredicted RBP12.35□□□□□ -0.43
CHRD-209ENST00000461120 CLCF1Q9UBD9 225 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 AURKCQ9UQB9 309 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 SLC5A6Q9Y289 635 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 TRAPPC4Q9Y296 219 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 MEMO1Q9Y316 297 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 ZNF175Q9Y473 711 aa12.35□□□□□ -0.43
CHRD-209ENST00000461120 NBEAL1Q6ZS30 2694 aa12.34□□□□□ -0.43
CHRD-209ENST00000461120 TRAV36DV7A0A075B6V5 113 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms