RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 REG4Q9BYZ8 158 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 OSGIN1Q9UJX0 560 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 CAPN7Q9Y6W3 813 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 GMNCA6NCL1 334 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 TMEM229AB2RXF0 380 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 RNF223E7ERA6 249 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 ZNF208O43345 1280 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 KLF4O43474 513 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 CXCL13O43927 109 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 TPST1O60507 370 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 CCDC22O60826 627 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 NPIPB7O75200 414 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 FCGR2AP12318 317 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 ME2P23368 584 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 SLC6A2P23975 617 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 FKBP2P26885 142 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 SFTPDP35247 375 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 EIF1AXP47813 144 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 CLK1P49759 484 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 MAP2K6P52564 334 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 RAC3P60763 192 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 RPS4XP62701 263 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 H3F3AP84243 136 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 SCARB2Q14108 478 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 VEZF1Q14119 521 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 LARS2Q15031 903 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 MAPRE2Q15555 327 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 SYT14P1Q58G82 188 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 RABL3Q5HYI8 236 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 HBMQ6B0K9 141 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 C6orf89Q6UWU4 347 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 C22orf34Q6ZV56 151 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 CCDC80Q76M96 950 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 BTLAQ7Z6A9 289 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 LSMEM1Q8N8F7 131 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 C11orf65Q8NCR3 313 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 HIPK4Q8NE63 616 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 RP9Q8TA86 221 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 SLC25A43Q8WUT9 341 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 OSTF1Q92882 214 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 WFDC6Q9BQY6 131 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 OR10A4Q9H209 315 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 GP6Q9HCN6 339 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 CTPS2Q9NRF8 586 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 CHRNA9Q9UGM1 479 aa12.12□□□□□ -0.47
SCAMP4-206ENST00000460767 NBEAL1Q6ZS30 2694 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 ABCA1O95477 2261 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 LOC100653049A0A140TA62 436 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 GJE1A6NN92 205 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 MRASO14807 208 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 DNPH1O43598 174 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 TPST2O60704 377 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 CYP7B1O75881 506 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 KRT34O76011 436 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 OPN1LWP04000 364 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 GKN3PP0CG01 181 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 RYKP34925 604 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 PCGF2P35227 344 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 IDUAP35475 653 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 HTR3AP46098 478 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 IDH2P48735 452 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 CARD18P57730 90 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 MERTKQ12866 999 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 CYLC2Q14093 348 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 ZNF311Q5JNZ3 666 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 TMPPEQ6ZT21 453 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 ZNF550Q7Z398 422 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 MTDHQ86UE4 582 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 GMPPAQ96IJ6 420 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 ARL5BQ96KC2 179 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 ZNF583Q96ND8 569 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 ELAC2Q9BQ52 826 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 OPN3Q9H1Y3 402 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 BCO1Q9HAY6 547 aa12.11□□□□□ -0.47
SCAMP4-206ENST00000460767 A8MV72 311 aaPredicted RBP12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 SMAD9O15198 467 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 THBDP07204 575 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 COX4I1P13073 169 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 HTR2AP28223 471 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 TACR3P29371 465 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 POLR2HP52434 150 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 DUSP7Q16829 419 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 FAM91A1Q658Y4 838 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 WBP2NLQ6ICG8 309 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 HACD2Q6Y1H2 254 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 P4HA3Q7Z4N8 544 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 ATG4DQ86TL0 474 aaPredicted RBP12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 LSRQ86X29 649 aaPredicted RBP12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 CNEP1R1Q8N9A8 125 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 GPR32P1Q8NGA4 272 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 OR10A6Q8NH74 314 aa12.1□□□□□ -0.47
SCAMP4-206ENST00000460767 C3orf49Q96BT1 292 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms