RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 FYTTD1Q96QD9 318 aaKnown RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 MYEF2Q9P2K5 600 aaKnown RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SUSD2Q9UGT4 822 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 A0A0X1KG70 313 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SURF4O15260 269 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SRPX2O60687 465 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 GALR3O60755 368 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 INHBBP09529 407 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 MLC1Q15049 377 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 NKAIN2Q5VXU1 208 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 ATCAYQ86WG3 371 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 LRRC28Q86X40 367 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SIMC1Q8NDZ2 872 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 OR4N2Q8NGD1 307 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 BAHD1Q8TBE0 780 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 RASD2Q96D21 266 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 Q96M85 177 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SYNPO2LQ9H987 977 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 PLEKHA1Q9HB21 404 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 UBQLN4Q9NRR5 601 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 LRIT1Q9P2V4 623 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 DNAJC13O75165 2243 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SERINC4A6NH21 518 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 DUX1O43812 170 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 FZD7O75084 574 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 KCNK2O95069 426 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 UCHL1P09936 223 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 ANXA3P12429 323 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 PGCP20142 388 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 DNASE1P24855 282 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 ZP2Q05996 745 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SELENBP1Q13228 472 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 TPBGQ13641 420 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SFXN4Q6P4A7 337 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 MED25Q71SY5 747 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 OR5AK2Q8NH90 309 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 OR14A2Q96R54 314 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 GPA33Q99795 319 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 METTL7AQ9H8H3 244 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 LYRM4Q9HD34 91 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 RBFOX1Q9NWB1 397 aaKnown RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 KCND3Q9UK17 655 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 UGT2A1Q9Y4X1 527 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 PTPRDP23468 1912 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CHP2O43745 196 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 RBBP9O75884 186 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CRYBB2P43320 205 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 RPS5P46782 204 aaKnown RBP10.73□□□□□ -0.69
NPHP4-204ENST00000460696 MAPK14Q16539 360 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF613Q6PF04 617 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 LSM14AQ8ND56 463 aaKnown RBP10.73□□□□□ -0.69
NPHP4-204ENST00000460696 DIO2Q92813 273 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 OR2A14Q96R47 310 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ELF4Q99607 663 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ARHGAP9Q9BRR9 750 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 SEMA6CQ9H3T2 930 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 C20orf141Q9NUB4 165 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 EVA1BQ9NVM1 165 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF224Q9NZL3 707 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CHST2Q9Y4C5 530 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CACNG2Q9Y698 323 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 TMEM14AQ9Y6G1 99 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 OPN1LWP04000 364 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 HEXBP07686 556 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 THBS1P07996 1170 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 HSF2Q03933 536 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 KCTD18Q6PI47 426 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CCDC190Q86UF4 302 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 EID2Q8N6I1 236 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 OR13C5Q8NGS8 318 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 SENP5Q96HI0 755 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-204ENST00000460696 LMF1Q96S06 567 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ORAI3Q9BRQ5 295 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 SLC25A19Q9HC21 320 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CD93Q9NPY3 652 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 VDAC3Q9Y277 283 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 FARSAQ9Y285 508 aaKnown RBP10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ALG5Q9Y673 324 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 FXYD6-FXYD2A0A087WZ82 144 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CTNSO60931 367 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 LIMS3P0CW19 117 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 LIMS4P0CW20 117 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 HTR2BP41595 481 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 TSPAN5P62079 268 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 PPP1CAP62136 330 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 SIRPAP78324 504 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 CDK5Q00535 292 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 SIGLEC14Q08ET2 396 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 P2RY14Q15391 338 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 HBMQ6B0K9 141 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 NIPAL3Q6P499 406 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 KIF18BQ86Y91 864 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 PLXDC1Q8IUK5 500 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 RASGRP3Q8IV61 690 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF595Q8IYB9 648 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 OR4M1Q8NGD0 313 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 OR2A5Q96R48 311 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms