RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MEX3DQ86XN8 651 aaKnown RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 TAGAPQ8N103 731 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 BEST3Q8N1M1 668 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 POGLUT1Q8NBL1 392 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 C17orf47Q8NEP4 570 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 PHOSPHO1Q8TCT1 267 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 HGDQ93099 445 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 DACT3Q96B18 629 aaPredicted RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 DMRTB1Q96MA1 342 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ING2Q9H160 280 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 UBQLN4Q9NRR5 601 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 AGPAT4Q9NRZ5 378 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 ZNF451Q9Y4E5 1061 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 PCDHGA10Q9Y5H3 936 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 MED13Q9UHV7 2174 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 SETXQ7Z333 2677 aaKnown RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 A0A0U1RQK1 487 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 SERINC4A6NH21 518 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CPSF4LA6NMK7 179 aaKnown RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 AHRRA9YTQ3 701 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 UBE2CO00762 179 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 GPR171O14626 319 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CLOCKO15516 846 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 HCRTR2O43614 444 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 FADS1O60427 444 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 TBXA2RP21731 343 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 TCEA1P23193 301 aaKnown RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 HTR2AP28223 471 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 MAGEA2P43356 314 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CCL11P51671 97 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ZNF136P52737 540 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 SLC34A1Q06495 639 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 TRIP10Q15642 601 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ZNF791Q3KP31 576 aaPredicted RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 ZFP1Q6P2D0 407 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 GEMIN6Q8WXD5 167 aaKnown RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 ZNF300Q96RE9 604 aaPredicted RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 ARHGDIGQ99819 225 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 SPATA5L1Q9BVQ7 753 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CPNE5Q9HCH3 593 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ATP13A2Q9NQ11 1180 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 DNAJB12Q9NXW2 375 aaKnown RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 STMN3Q9NZ72 180 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CYB5R1Q9UHQ9 305 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 NBEAQ8NFP9 2946 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 A0A0G2JMM0 328 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 SERTM2A0A1B0GWG4 89 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 A0A1W2PPB8 328 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 A0A1W2PRS3 328 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 OR6C70A6NIJ9 312 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 KIR3DP1A8MWS1 328 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 CSTAP01040 98 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 THY1P04216 161 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 IFNW1P05000 195 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 FBXO45P0C2W1 286 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 CCL3P10147 92 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 ICAM2P13598 275 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 FASP25445 335 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 PTDSS1P48651 473 aaKnown RBP9.4□□□□□ -0.9
USP39-210ENST00000459775 PNLIPRP2P54317 469 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 RGS8P57771 180 aaPredicted RBP9.4□□□□□ -0.9
USP39-210ENST00000459775 FGFBP1Q14512 234 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 NRF1Q16656 503 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 TBRG1Q3YBR2 411 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 FNDC7Q5VTL7 733 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 DHRS4L2Q6PKH6 230 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 KLHL36Q8N4N3 616 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 TMEM156Q8N614 296 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 SLC5A8Q8N695 610 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 CLEC1AQ8NC01 280 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 DUSP19Q8WTR2 217 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 ASB15Q8WXK1 588 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 FAM71F1Q96KD3 344 aaPredicted RBP9.4□□□□□ -0.9
USP39-210ENST00000459775 CCNL2Q96S94 520 aaPredicted RBP9.4□□□□□ -0.9
USP39-210ENST00000459775 NPAS1Q99742 590 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 HES7Q9BYE0 225 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 DPH1Q9BZG8 443 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 MAGIXQ9H6Y5 334 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 SLC13A4Q9UKG4 626 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 OAZ3Q9UMX2 235 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 YARS2Q9Y2Z4 477 aaKnown RBP9.4□□□□□ -0.9
USP39-210ENST00000459775 IFT52Q9Y366 437 aa9.4□□□□□ -0.9
USP39-210ENST00000459775 H0YJX3 145 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 SCDO00767 359 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 GNGT2O14610 69 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 GNB5O14775 395 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 PRSS23O95084 383 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 ANGPTL1O95841 491 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 LDLRP01130 860 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 THBS1P07996 1170 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 TMIGD3P0DMS9 266 aaPredicted RBP9.4□□□□□ -0.91
USP39-210ENST00000459775 GAAP10253 952 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 PTGDSP41222 190 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 PCYT1AP49585 367 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 SSR4P51571 173 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 CCR4P51679 360 aa9.4□□□□□ -0.91
USP39-210ENST00000459775 CDH12P55289 794 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms