RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RAMP1O60894 148 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 CXCR1P25024 350 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC1A3P43003 542 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 ZNF83P51522 516 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 CRISP3P54108 245 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 DSTNP60981 165 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 COPZ1P61923 177 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 EPS8Q12929 822 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC9B1Q4ZJI4 515 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 LIN52Q52LA3 116 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 AGBL2Q5U5Z8 902 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 KLHL17Q6TDP4 642 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 SEZ6L2Q6UXD5 910 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 ZNF440Q8IYI8 595 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 OR52P1PQ8NH57 321 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 HS6ST2Q96MM7 605 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 TRIM2Q9C040 744 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 TAS2R16Q9NYV7 291 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 NPAP1Q9NZP6 1156 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 CALML5Q9NZT1 146 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 TRAPPC4Q9Y296 219 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC9A8Q9Y2E8 581 aa13.88□□□□□ -0.19
CHCHD3-204ENST00000457942 M0R1B8 84 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 UBDO15205 165 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 DANCRP0C864 163 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 GKN3PP0CG01 181 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 ETFAP13804 333 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 NCF2P19878 526 aaPredicted RBP13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 RPS4Y1P22090 263 aaKnown RBP13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 IDUAP35475 653 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC16A1P53985 500 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 ETFDHQ16134 617 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 GSTA3Q16772 222 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 C9orf135Q5VTT2 229 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC22A25Q6T423 547 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 TMEM108Q6UXF1 575 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 ZNF836Q6ZNA1 936 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 HDXQ7Z353 690 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 OR52E4Q8NGH9 312 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 ITCHQ96J02 903 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 TPT1P8Q9HAU6 139 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 RLIMQ9NVW2 624 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 PARPBPQ9NWS1 579 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 ZIM2Q9NZV7 527 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 MALT1Q9UDY8 824 aa13.87□□□□□ -0.19
CHCHD3-204ENST00000457942 CR1P17927 2039 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 ZC3H12DA2A288 527 aaKnown RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 SHISA9B4DS77 424 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 FAAHO00519 579 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 SASH3O75995 380 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 PGM3O95394 542 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 GPIP06744 558 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 IMPDH2P12268 514 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 POLR2JP52435 117 aaKnown RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 SRSF2Q01130 221 aaKnown RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 LARS2Q15031 903 aaKnown RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 OR7A5Q15622 319 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 PGGHGQ32M88 737 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 GTDC1Q4AE62 458 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 RPS26P11Q5JNZ5 115 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 OTUD3Q5T2D3 398 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 AP1ARQ63HQ0 302 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 OR7E24Q6IFN5 339 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 DEPDC4Q8N2C3 294 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 MIER2Q8N344 545 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 OR9I1Q8NGQ6 314 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 AURKBQ96GD4 344 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 ATP6V1G3Q96LB4 118 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 OR52B2Q96RD2 323 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 TAPBPLQ9BX59 468 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 REG4Q9BYZ8 158 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC6A13Q9NSD5 602 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 MGAT4BQ9UQ53 548 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 ZNF443Q9Y2A4 671 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 FLVCR1Q9Y5Y0 555 aa13.86□□□□□ -0.19
CHCHD3-204ENST00000457942 OVOL3O00110 214 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 PTNP21246 168 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 ACVR1BP36896 505 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 MAP2K6P52564 334 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC18A1P54219 525 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 STX1BP61266 288 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 SPOCK1Q08629 439 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 CEACAM7Q14002 265 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 AGAP6Q5VW22 663 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 WBP2NLQ6ICG8 309 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 PAQR6Q6TCH4 344 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 KLHL24Q6TFL4 600 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 MSANTD1Q6ZTZ1 278 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 GPAT4Q86UL3 456 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 VPS33AQ96AX1 596 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 TMEM19Q96HH6 336 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 RADILQ96JH8 1075 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 MAELQ96JY0 434 aaKnown RBP13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 TRAF4Q9BUZ4 470 aaPredicted RBP13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 C1QTNF6Q9BXI9 259 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 SLCO5A1Q9H2Y9 848 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 ARMC7Q9H6L4 198 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 BARX1Q9HBU1 254 aaPredicted RBP13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 ADPRHL2Q9NX46 363 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms