RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 FOXN4Q96NZ1 517 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 ATOH8Q96SQ7 321 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 GPR21Q99679 349 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 BOCQ9BWV1 1114 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 PHF7Q9BWX1 381 aaPredicted RBP6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 BARHL1Q9BZE3 327 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 PCDHAC1Q9H158 963 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 FBRSQ9HAH7 460 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 MYNNQ9NPC7 610 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 DLL4Q9NR61 685 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 SLCO1C1Q9NYB5 712 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 ZDHHC3Q9NYG2 299 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 LRFN1Q9P244 771 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 SMPXQ9UHP9 88 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 NAGKQ9UJ70 344 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 PCDHB14Q9Y5E9 798 aa6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 ZFC3H1O60293 1989 aaKnown RBP6.33□□□□□ -1.4
CUBNP3-201ENST00000457461 A0A087WUJ7 227 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 FAM171A2A8MVW0 826 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 H7BY64 318 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SCN2BO60939 215 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 RP2O75695 350 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 RGS11O94810 467 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SOD1P00441 154 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 MT-ND1P03886 318 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 RPLP1P05386 114 aaKnown RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ITGA5P08648 1049 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ELFN1P0C7U0 828 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SCGB1A1P11684 91 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 MTHFD2P13995 350 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 GABRA1P14867 456 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 IL7RP16871 459 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 EPHA1P21709 976 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 FGF7P21781 194 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 CCNOP22674 350 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 CD1BP29016 333 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 DRD3P35462 400 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 GGT2P36268 569 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 P2RY2P41231 377 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 GLRBP48167 497 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 EVX1P49640 407 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 AGFG1P52594 562 aaKnown RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 LSM6P62312 80 aaKnown RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 CHRNB3Q05901 458 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 DPTQ07507 201 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 C2orf80Q0P641 193 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SRSF5Q13243 272 aaKnown RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 MRPL49Q13405 166 aaKnown RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 PIN1Q13526 163 aaPredicted RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC10A1Q14973 349 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 AGERQ15109 404 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 RBMS2Q15434 407 aaKnown RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SHBQ15464 509 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 IMPG1Q17R60 797 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ISXQ2M1V0 245 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 C3orf38Q5JPI3 329 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 AGBL4Q5VU57 503 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ZNF529Q6P280 563 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 QSOX2Q6ZRP7 698 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ZCCHC23Q6ZST2 131 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 Q6ZVL8 140 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ERN2Q76MJ5 926 aaKnown RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC29A4Q7RTT9 530 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 BIVMQ86UB2 503 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ZNF573Q86YE8 665 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SPNS2Q8IVW8 549 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 BPIFCQ8NFQ6 507 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 OR56A4Q8NGH8 313 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 OR4Q3Q8NH05 313 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 OR10A6Q8NH74 314 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 C2CD4CQ8TF44 421 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 UPRTQ96BW1 309 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 OTUB1Q96FW1 271 aaPredicted RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 CLUHP3Q96NS8 147 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ALG8Q9BVK2 526 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 IFT27Q9BW83 186 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 GATA5Q9BWX5 397 aaPredicted RBP6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 ANGPTL4Q9BY76 406 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 DPH1Q9BZG8 443 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 PCBD2Q9H0N5 130 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 PNPOQ9NVS9 261 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 GALPQ9UBC7 116 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 TRPC4Q9UBN4 977 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 CRLS1Q9UJA2 301 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 FBXL3Q9UKT7 428 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 CDYLQ9Y232 598 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC35A3Q9Y2D2 325 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 TMED3Q9Y3Q3 217 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 PRSS21Q9Y6M0 314 aa6.32□□□□□ -1.4
CUBNP3-201ENST00000457461 TCRBV16S1A1N1A0A5B0 115 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 NKX6-3A6NJ46 265 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 A8MT66 165 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 C9orf172C9J069 976 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 F5H0A9 414 aaPredicted RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 UPK1AO00322 258 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 KLK8O60259 260 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 LZTS3O60299 673 aaPredicted RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PRAF2O60831 178 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 WBP4O75554 376 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms