RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
VPS16-205ENST00000453689 MCHR1Q99705 422 aa13.12□□□□□ -0.31
VPS16-205ENST00000453689 POLR2J2Q9GZM3 115 aaKnown RBP13.12□□□□□ -0.31
VPS16-205ENST00000453689 POLR2J3Q9H1A7 115 aaKnown RBP13.12□□□□□ -0.31
VPS16-205ENST00000453689 TMEM27Q9HBJ8 222 aa13.12□□□□□ -0.31
VPS16-205ENST00000453689 JKAMPQ9P055 326 aa13.12□□□□□ -0.31
VPS16-205ENST00000453689 RPS6KB2Q9UBS0 482 aa13.12□□□□□ -0.31
VPS16-205ENST00000453689 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 GJE1A6NN92 205 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 TPST2O60704 377 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 SEMG1P04279 462 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 CRHP06850 196 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 FCGR2AP12318 317 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 HTR3AP46098 478 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 CARD18P57730 90 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 OR1Q1Q15612 314 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 DEF8Q6ZN54 512 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 SPATA24Q86W54 205 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 MCEMP1Q8IX19 187 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 ZNF295-AS1Q8N0V1 137 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 OSTF1Q92882 214 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 RNASE6Q93091 150 aaKnown RBP13.11□□□□□ -0.31
VPS16-205ENST00000453689 SLC47A1Q96FL8 570 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 SRXN1Q9BYN0 137 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 COQ10BQ9H8M1 238 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 CTPS2Q9NRF8 586 aa13.11□□□□□ -0.31
VPS16-205ENST00000453689 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
VPS16-205ENST00000453689 A0A1B0GWA3 101 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 A0A1W2PNR3 127 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 SYNGR4O95473 234 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 NQO1P15559 274 aaKnown RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 TACR3P29371 465 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 SLC7A1P30825 629 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 UQCRC1P31930 480 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 APOBEC1P41238 236 aaKnown RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 KIR2DL2P43627 348 aaPredicted RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 POLR2HP52434 150 aaKnown RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 SIRPAP78324 504 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 GUSBP1Q15486 140 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 ZNF239Q16600 458 aaKnown RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 ENTPD8Q5MY95 495 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 EEF1A1P5Q5VTE0 462 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 ZNF613Q6PF04 617 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 LUZP2Q86TE4 346 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 CNEP1R1Q8N9A8 125 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 DNAJA4Q8WW22 397 aaPredicted RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 CPNE4Q96A23 557 aaPredicted RBP13.1□□□□□ -0.31
VPS16-205ENST00000453689 C3orf49Q96BT1 292 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 STARD4Q96DR4 205 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 LRRC46Q96FV0 321 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 PRR14Q9BWN1 585 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 AMBRA1Q9C0C7 1298 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 ADAM19Q9H013 955 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 PIGMQ9H3S5 423 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 MAGIXQ9H6Y5 334 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 C12orf10Q9HB07 376 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 SERINC1Q9NRX5 453 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
VPS16-205ENST00000453689 A0A0B4J2E0 115 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 A0A1B0GX12 115 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 TCRBV3S1A0A5B6 114 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 DHRS12A0PJE2 317 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 OR5F1O95221 314 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 GPIP06744 558 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 UMPSP11172 480 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 TAS2R41P59536 307 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 VLDLRP98155 873 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 SNTB1Q13884 538 aaKnown RBP13.09□□□□□ -0.31
VPS16-205ENST00000453689 FAM98BQ52LJ0 330 aaKnown RBP13.09□□□□□ -0.31
VPS16-205ENST00000453689 SYT14P1Q58G82 188 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
VPS16-205ENST00000453689 ULK3Q6PHR2 472 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 GDF7Q7Z4P5 450 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 BTLAQ7Z6A9 289 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 ATG4DQ86TL0 474 aaPredicted RBP13.09□□□□□ -0.31
VPS16-205ENST00000453689 ADGRG3Q86Y34 549 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 ADGRG5Q8IZF4 528 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 ADAMTS16Q8TE57 1224 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 ROBO4Q8WZ75 1007 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 RSRC1Q96IZ7 334 aaKnown RBP13.09□□□□□ -0.31
VPS16-205ENST00000453689 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 PRRC1Q96M27 445 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 OR5B2Q96R09 309 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 TIGARQ9NQ88 270 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 SELENONQ9NZV5 590 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 CHRNA9Q9UGM1 479 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 FOXD3Q9UJU5 478 aaPredicted RBP13.09□□□□□ -0.31
VPS16-205ENST00000453689 OSGIN1Q9UJX0 560 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 CLEC4AQ9UMR7 237 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 SPIN1Q9Y657 262 aaPredicted RBP13.09□□□□□ -0.31
VPS16-205ENST00000453689 UNC79Q9P2D8 2635 aa13.09□□□□□ -0.31
VPS16-205ENST00000453689 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.32
VPS16-205ENST00000453689 A8MXE2 369 aa13.08□□□□□ -0.32
VPS16-205ENST00000453689 MSTNO14793 375 aa13.08□□□□□ -0.32
VPS16-205ENST00000453689 SMNDC1O75940 238 aaKnown RBP eCLIP13.08□□□□□ -0.32
VPS16-205ENST00000453689 FABP3P05413 133 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms