RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 A0A1W2PP18 115 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 ZC3H12DA2A288 527 aaKnown RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 DPRXA6NFQ7 191 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 TRIM64A6NGJ6 449 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 TRIM64BA6NI03 449 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 OR5H1A6NKK0 313 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 HNRNPCL2B2RXH8 293 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 HNRNPCL3B7ZW38 293 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 CLIC1O00299 241 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 SMAD7O15105 426 aaKnown RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 HNRNPCL1O60812 293 aaKnown RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 RAMP1O60894 148 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 PGM3O95394 542 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 TGDSO95455 350 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 GPIP06744 558 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 THBS1P07996 1170 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 HNRNPCL4P0DMR1 293 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 IMPDH2P12268 514 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 HOXB4P17483 251 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 NCF2P19878 526 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 FAPQ12884 760 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 MAPK11Q15759 364 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 ZNF672Q499Z4 452 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 RPS26P11Q5JNZ5 115 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 RNF220Q5VTB9 566 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 WBP2NLQ6ICG8 309 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 PAQR6Q6TCH4 344 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 CASP12Q6UXS9 341 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 CIARTQ8N365 385 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 LILRB1Q8NHL6 650 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 SMAP2Q8WU79 429 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 DYDC1Q8WWB3 177 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 GTF2H4Q92759 462 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 TRMT61AQ96FX7 289 aaKnown RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 TAS2R16Q9NYV7 291 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 UPB1Q9UBR1 384 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 ZNF443Q9Y2A4 671 aaPredicted RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 SLC9A8Q9Y2E8 581 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 IFT52Q9Y366 437 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 PCDHB14Q9Y5E9 798 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
CHD3-206ENST00000452447 ABCA2Q9BZC7 2435 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 ABCA1O95477 2261 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 HEXAP06865 529 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 IDUAP35475 653 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 RGNQ15493 299 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 OR7E24Q6IFN5 339 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 SLC2A7Q6PXP3 512 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 KBTBD8Q8NFY9 601 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 NEUROG1Q92886 237 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 TAPBPLQ9BX59 468 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 ALG2Q9H553 416 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 SLCO1B3Q9NPD5 702 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 FAIMQ9NVQ4 179 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 MALT1Q9UDY8 824 aa11.37□□□□□ -0.59
CHD3-206ENST00000452447 C5orf58C9J3I9 102 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 ABCD4O14678 606 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 LY6G6DO95868 133 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 SOD3P08294 240 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 DANCRP0C864 163 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 NTF4P34130 210 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 ACAA2P42765 397 aaKnown RBP11.36□□□□□ -0.59
CHD3-206ENST00000452447 FADDQ13158 208 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 CEACAM7Q14002 265 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 SLC17A1Q14916 467 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 OR7A5Q15622 319 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 ZNF311Q5JNZ3 666 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 OTUD3Q5T2D3 398 aaPredicted RBP11.36□□□□□ -0.59
CHD3-206ENST00000452447 KLHL17Q6TDP4 642 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 SEZ6L2Q6UXD5 910 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 TMEM108Q6UXF1 575 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 CLIP4Q8N3C7 705 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 OR52E4Q8NGH9 312 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 OR52N5Q8NH56 324 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 RADILQ96JH8 1075 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 ATP6V1G3Q96LB4 118 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 SPATA9Q9BWV2 254 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 TRIM2Q9C040 744 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 PAIP1Q9H074 479 aaKnown RBP11.36□□□□□ -0.59
CHD3-206ENST00000452447 CISD1Q9NZ45 108 aaKnown RBP11.36□□□□□ -0.59
CHD3-206ENST00000452447 NPAP1Q9NZP6 1156 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 CCDC167Q9P0B6 97 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 FLVCR1Q9Y5Y0 555 aa11.36□□□□□ -0.59
CHD3-206ENST00000452447 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
CHD3-206ENST00000452447 A0A096LPI6 279 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 LIPT2A6NK58 231 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 A8MVM7 634 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 AKR7A3O95154 331 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 NUDT7P0C024 238 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 MRPL19P49406 292 aaKnown RBP11.35□□□□□ -0.59
CHD3-206ENST00000452447 IDH3AP50213 366 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 AQP5P55064 265 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 TGFBR3Q03167 851 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 BNIP2Q12982 314 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 PRAMEF8Q5VWM4 474 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 PRAMEF7Q5VXH5 474 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 TMEM225Q6GV28 225 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 GPAT4Q86UL3 456 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 TMEM99Q8N816 258 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms