RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 YTHDF2Q9Y5A9 579 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 SLC22A7Q9Y694 548 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NPIPA5A0A0B4J1W7 369 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ABHD14A-ACY1A0A1B0GW23 586 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TSPAN11A1L157 253 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GABRR3A8MPY1 467 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 A8MVM7 634 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 LINC00587B1AMM8 73 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 EEF1E1-BLOC1S5C9J1V9 151 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ANHXE9PGG2 379 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NPIPA5E9PKD4 350 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 C17orf112F2Z3M2 114 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NPIPA3F8WFD2 350 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 FFAR2O15552 330 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TCF21O43680 179 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 USP2O75604 605 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 DDNO94850 711 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 GOT2P00505 430 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 HLA-DQA2P01906 255 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 LPLP06858 475 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MMP3P08254 477 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 EDN3P14138 238 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CD99P14209 185 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 RHOQP17081 205 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MMP11P24347 488 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ITGB7P26010 798 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 APEX1P27695 318 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 TACR3P29371 465 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MC4RP32245 332 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CASRP41180 1078 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 WASP42768 502 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NPY4RP50391 375 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NOVA1P51513 510 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 ZNF84P51523 738 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 KLF3P57682 345 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 NUTF2P61970 127 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 RPS25P62851 125 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 POLR2LP62875 67 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 TCP10Q12799 353 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SERTAD2Q14140 314 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GBX1Q14549 363 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GANABQ14697 944 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.06□□□□□ -2.08
USP53-202ENST00000450251 LRRC37A5PQ49AS3 106 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GGTA1PQ4G0N0 100 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CELF3Q5SZQ8 465 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 CFAP161Q6P656 301 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 DRAM2Q6UX65 266 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TMPRSS7Q7RTY8 843 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ACOT1Q86TX2 421 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 VRK2Q86Y07 508 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NPAS4Q8IUM7 802 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NRMQ8IXM6 262 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GPR135Q8IZ08 494 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 C7orf61Q8IZ16 206 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GCNT2Q8N0V5 402 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NLGN1Q8N2Q7 840 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GALNT16Q8N428 558 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ZDHHC22Q8N966 263 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OR2AK2Q8NG84 335 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OR6K2Q8NGY2 324 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 FBLIM1Q8WUP2 373 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SLC35F5Q8WV83 523 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 FAM3CQ92520 227 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PSMF1Q92530 271 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GAL3ST4Q96RP7 486 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 DMRTA2Q96SC8 542 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 DPH7Q9BTV6 452 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GGACTQ9BVM4 153 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PARD6GQ9BYG4 376 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 SLC35B3Q9H1N7 401 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OSBPL2Q9H1P3 480 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CPVLQ9H3G5 476 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ZDHHC11Q9H8X9 412 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GBA2Q9HCG7 927 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 OR2S2Q9NQN1 319 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CYSLTR2Q9NS75 346 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 RYDENQ9NUL5 291 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 NPIPA1Q9UND3 350 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SLC35A3Q9Y2D2 325 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MRPS28Q9Y2Q9 187 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 ZNF281Q9Y2X9 895 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MAP4K5Q9Y4K4 846 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PCDHGA2Q9Y5H1 932 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CLDN16Q9Y5I7 305 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 A0A1W2PN81 502 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MCRIP1C9JLW8 97 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CLDN34H7C241 214 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SLC17A3O00476 420 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ZNF593O00488 134 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 SMAD9O15198 467 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 RNGTTO60942 597 aaKnown RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 NDUFB6O95139 128 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 KCNK5O95279 499 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 HPP00738 406 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CST4P01036 141 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CSTAP01040 98 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CHRM4P08173 479 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SLC10A3P09131 477 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SNHG28P0DPA3 235 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms