RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 HTR2AP28223 471 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 ART1P52961 327 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 ARFIP2P53365 341 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 COPZ1P61923 177 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 EGR4Q05215 589 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 DMTNQ08495 405 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 RBBP4Q09028 425 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 ITGADQ13349 1161 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 SCARB2Q14108 478 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 SLC17A1Q14916 467 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 TSC22D1Q15714 1073 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 PAQR6Q6TCH4 344 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 STEAP2Q8NFT2 490 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 S100PBPQ96BU1 408 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 ZC3HAV1LQ96H79 300 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 TMEM204Q9BSN7 226 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 PRR14Q9BWN1 585 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 FANCFQ9NPI8 374 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 MED4Q9NPJ6 270 aa12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.45□□□□□ -0.42
RTFDC1-204ENST00000449062 A8MVM7 634 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 FTCDNL1E5RQL4 147 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 FXYD1O00168 92 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 GPR171O14626 319 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 ANGPT2O15123 496 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 SLC6A2P23975 617 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 MDH1P40925 334 aaKnown RBP12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 MTPNP58546 118 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 KLF10Q13118 480 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 CEACAM7Q14002 265 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 NANOGP8Q6NSW7 305 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 C6orf89Q6UWU4 347 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 CADM2Q8N3J6 435 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 TMEM99Q8N816 258 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 HIPK4Q8NE63 616 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 PIGXQ8TBF5 258 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 STK35Q8TDR2 534 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 IGFBPL1Q8WX77 278 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 ZHX1-C8orf76Q96EF9 292 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 PIK3IP1Q96FE7 263 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 PTDSS2Q9BVG9 487 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 NANOGQ9H9S0 305 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
RTFDC1-204ENST00000449062 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 M0QX08 132 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 PDLIM1O00151 329 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 RAF1P04049 648 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 VIMP08670 466 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 TROVE2P10155 538 aaKnown RBP eCLIP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 COX5AP20674 150 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 IGHV1-2P23083 117 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 DNASE1P24855 282 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 IDUAP35475 653 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 CRYBA2P53672 197 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 SF3A3Q12874 501 aaKnown RBP eCLIP12.43□□□□□ -0.426e-9■■■■■ 59.3
RTFDC1-204ENST00000449062 NFYCQ13952 458 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 CAPRIN1Q14444 709 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 TAB1Q15750 504 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 DUSP7Q16829 419 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 BEX5Q5H9J7 111 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 COQ5Q5HYK3 327 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 C1orf140Q5VVS0 124 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 FBXW9Q5XUX1 488 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 CALHM3Q86XJ0 350 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 KRT73Q86Y46 540 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 ZNF433Q8N7K0 673 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 C11orf65Q8NCR3 313 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 HSD17B8Q92506 261 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 USB1Q9BQ65 265 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 SPATA5L1Q9BVQ7 753 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 PIF1Q9H611 641 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 C12orf10Q9HB07 376 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 EMC3Q9P0I2 261 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 EDARQ9UNE0 448 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 NF1P21359 2839 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 VPS13CQ709C8 3753 aa12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 NIPBLQ6KC79 2804 aaeCLIP12.43□□□□□ -0.42
RTFDC1-204ENST00000449062 ZFHX3Q15911 3703 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 A0A1B0GWA3 101 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 PRORSD1PA6NEY8 169 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 AQP7P3A6NL99 342 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 AKR7A3O95154 331 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 LGI1O95970 557 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 NPPAP01160 153 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 GPIP06744 558 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 AQP1P29972 269 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 ADSLP30566 484 aaPredicted RBP12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 FOXG1P55316 489 aaPredicted RBP12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 OR7A5Q15622 319 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 TRMT5Q32P41 509 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 ZNF100Q8IYN0 542 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 GPR32P1Q8NGA4 272 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 OR10A6Q8NH74 314 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 MFSD8Q8NHS3 518 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 KISS1RQ969F8 398 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms