RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 KIFC1Q9BW19 673 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 FOXJ3Q9UPW0 622 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ZKSCAN5Q9Y2L8 839 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 VWA7Q9Y334 891 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 BZW2Q9Y6E2 419 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 AGAP5A6NIR3 686 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ZNF716A6NP11 495 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CLDN25C9JDP6 229 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 FOXE1O00358 373 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 TNFRSF13BO14836 293 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 DUS4LO95620 317 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 ANGPTL1O95841 491 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 IGKV3-15P01624 115 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 IGHV4-59P01825 116 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 GBAP04062 536 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 LINGO3P0C6S8 592 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 PORP16435 677 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 RAD52P43351 418 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ALDH3B1P43353 468 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 IER3P46695 156 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 MARCKSL1P49006 195 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 TGFBR3Q03167 851 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 DHX34Q14147 1143 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 TECRLQ5HYJ1 363 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 C9orf135Q5VTT2 229 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 FRRS1Q6ZNA5 592 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 MYPOPQ86VE0 399 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 LDLRAD3Q86YD5 345 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 C1orf174Q8IYL3 243 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 LYG1Q8N1E2 194 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 OR4K14Q8NGD5 310 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 TBC1D15Q8TC07 691 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CALML6Q8TD86 181 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ST7LQ8TDW4 575 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ZFP90Q8TF47 636 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CTNNBL1Q8WYA6 563 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 PTCD3Q96EY7 689 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 LINGO1Q96FE5 620 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 RBBP8Q99708 897 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ASCL2Q99929 193 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 GAL3ST1Q99999 423 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 IL22Q9GZX6 179 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CCDC68Q9H2F9 335 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 DDX31Q9H8H2 851 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 WDR41Q9HAD4 459 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 TMEM165Q9HC07 324 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 FBXO6Q9NRD1 293 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 TRMT6Q9UJA5 497 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 IGHV2OR16-5A0A0B4J2B6 119 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 MACROD2A1Z1Q3 448 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 OR6C65A6NJZ3 312 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 GMFGO60234 142 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 SH3BGRLO75368 114 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 NME6O75414 186 aaPredicted RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 WDR47O94967 919 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 TTC4O95801 387 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 FAM58BPP0C7Q3 252 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 HOXD3P31249 432 aaPredicted RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 PTPN7P35236 360 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 BSGP35613 385 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 MAGEA8P43361 318 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 MAGEB1P43366 347 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 CDKL1Q00532 357 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 LARS2Q15031 903 aaKnown RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 NSUN5P1Q3KNT7 163 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 TMEM176BQ3YBM2 270 aaPredicted RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 HIKESHIQ53FT3 197 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 DHRS7BQ6IAN0 325 aaPredicted RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 C11orf88Q6PI97 169 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 KLHL24Q6TFL4 600 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 LHFPL2Q6ZUX7 228 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 ZNF627Q7L945 461 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 NDUFA11Q86Y39 141 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 DENND6AQ8IWF6 608 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 GSPT2Q8IYD1 628 aaKnown RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 LAS2Q8IYD9 372 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 CDYL2Q8N8U2 506 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 SDR9C7Q8NEX9 313 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 SLC9A6Q92581 669 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 RAB1CQ92928 201 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 RGMAQ96B86 450 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 ARL5BQ96KC2 179 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 EFCAB11Q9BUY7 163 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 OR51B5Q9H339 312 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 EMC3Q9P0I2 261 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 MYEF2Q9P2K5 600 aaKnown RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 NOSIPQ9Y314 301 aaKnown RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 CMAHPQ9Y471 501 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.7□□□□□ -1.986e-6■■□□□ 13.3
PMS1-215ENST00000447232 PKHD1P08F94 4074 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 ARPC4-TTLL3A0A0A6YYG9 625 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 GJE1A6NN92 205 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 RNASEK-C17orf49H0YIS7 233 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 KIF2AO00139 706 aaPredicted RBP2.7□□□□□ -1.98
PMS1-215ENST00000447232 SPOPO43791 374 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 SERPING1P05155 500 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 MAKP20794 623 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 NR4A1P22736 598 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 CHATP28329 748 aa2.7□□□□□ -1.98
PMS1-215ENST00000447232 MPGP29372 298 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms