RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	OR4C6	Q8NH72	309 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	ACAD8	Q9UKU7	415 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	ZMIZ1	Q9ULJ6	1067 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3D	A0A087WVF3	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3I	A0A087WXS9	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3E	A0A087X179	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3K	A0A087X1G2	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TRABD2B	A6NFA1	517 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	KDM4E	B2RXH2	506 aa	Predicted RBP	11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3L	B9A6J9	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	BLOC1S5-TXNDC5	H3BN57	136 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	GPR171	O14626	319 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	EMC8	O43402	210 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	PRICKLE3	O43900	615 aa	Predicted RBP	11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	CTSB	P07858	339 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	ACSM4	P0C7M7	580 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3H	P0C7X1	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	HTR1F	P30939	366 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TFF2	Q03403	129 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	PLA1A	Q53H76	456 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3G	Q6DHY5	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	OR5M10	Q6IEU7	315 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3C	Q6IPX1	549 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	MFSD12	Q6NUT3	480 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	NIPAL3	Q6P499	406 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TRIL	Q7L0X0	811 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	MEPCE	Q7L2J0	689 aa	Known RBP	11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	ARL6IP6	Q8N6S5	226 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	RELL2	Q8NC24	303 aa	Predicted RBP	11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	DUSP18	Q8NEJ0	188 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TMEM239	Q8WW34	195 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	LCN9	Q8WX39	176 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	SMARCD2	Q92925	531 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	VWCE	Q96DN2	955 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	BPIFA2	Q96DR5	249 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	CAPNS2	Q96L46	248 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	OR1F2P	Q96R84	312 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	NMNAT3	Q96T66	252 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	PINK1	Q9BXM7	581 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	TMEM138	Q9NPI0	162 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	PRDM7	Q9NQW5	492 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	MARK1	Q9P0L2	795 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	ASB4	Q9Y574	426 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	IER3IP1	Q9Y5U9	82 aa		11.58	□□□□□ -0.56
DDR1-238	ENST00000446312	C17orf51	A8MQB3	221 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312		M0R233	179 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	CBX7	O95931	251 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	REEP5	Q00765	189 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	DMRTC1	Q5HYR2	192 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	BICRAL	Q6AI39	1079 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	HBM	Q6B0K9	141 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	LINC00471	Q8N535	108 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	C1orf216	Q8TAB5	229 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	SETD7	Q8WTS6	366 aa	Known RBP	11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	TCEAL3	Q969E4	200 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	SRA1	Q9HD15	236 aa	Known RBP	11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	CLDND1	Q9NY35	253 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	ATG12	O94817	140 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	MT-ND5	P03915	603 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	RAF1	P04049	648 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	RRAS	P10301	218 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	TM4SF4	P48230	202 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	NDUFA9	Q16795	377 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	SLC36A2	Q495M3	483 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	AKIRIN2	Q53H80	203 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	CYB5R2	Q6BCY4	276 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	BEND4	Q6ZU67	534 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	FAM181A	Q8N9Y4	354 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	OR51Q1	Q8NH59	317 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	RPLP0P6	Q8NHW5	317 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	RASD2	Q96D21	266 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	ARL5B	Q96KC2	179 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	ELF4	Q99607	663 aa	Predicted RBP	11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	ZNF649	Q9BS31	505 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	C11orf49	Q9H6J7	331 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	NOX4	Q9NPH5	578 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	CYSLTR2	Q9NS75	346 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	KCNE5	Q9UJ90	142 aa		11.57	□□□□□ -0.56
DDR1-238	ENST00000446312	RP1	P56715	2156 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	KIAA1671	Q9BY89	1806 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	RIIAD1	A6NNX1	92 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	KCNAB3	O43448	404 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	WDPCP	O95876	746 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	TF	P02787	698 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	HK1	P19367	917 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	FGF9	P31371	208 aa	Predicted RBP	11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	ERVK-25	P63136	954 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	SHC2	P98077	582 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	STX4	Q12846	297 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	BAMBI	Q13145	260 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	IRF4	Q15306	451 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	C11orf88	Q6PI97	169 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	C5orf46	Q6UWT4	87 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	CMTM4	Q8IZR5	234 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	MEIOB	Q8N635	442 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	POGLUT1	Q8NBL1	392 aa		11.56	□□□□□ -0.56
DDR1-238	ENST00000446312	ZNF485	Q8NCK3	441 aa		11.56	□□□□□ -0.56

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