RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SPG21Q9NZD8 308 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 OBSL1O75147 1896 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 NPIPA5A0A0B4J1W7 369 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 RIIAD1A6NNX1 92 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 NPIPA7E9PJI5 369 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 RPLP2P05387 115 aaKnown RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 NPIPA8P0DM63 369 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 TYRP1P17643 537 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 PVALBP20472 110 aaPredicted RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 ANXA11P50995 505 aaKnown RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 GMFBP60983 142 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 UBE2IP63279 158 aaKnown RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 ZNF658BQ4V348 819 aaPredicted RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 PM20D2Q8IYS1 436 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 LNX2Q8N448 690 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 SLC16A11Q8NCK7 471 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 SETD7Q8WTS6 366 aaKnown RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 SNX33Q8WV41 574 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 CDS1Q92903 461 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 RHBGQ9H310 441 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 EDARQ9UNE0 448 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 PLEKHM1Q9Y4G2 1056 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 ALPK2Q86TB3 2170 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 A0A1W2PR48 441 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 GRM6O15303 877 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 LILRB5O75023 590 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 FAM209BQ5JX69 171 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 OLFML2AQ68BL7 652 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 ZNF836Q6ZNA1 936 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 USP50Q70EL3 339 aaPredicted RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 KCT2Q8NC54 265 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 OR4C16Q8NGL9 310 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 OR8S1Q8NH09 359 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 DUSP19Q8WTR2 217 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 ING5Q8WYH8 240 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 PRSS27Q9BQR3 290 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 INPP5EQ9NRR6 644 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 CTSFQ9UBX1 484 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 OR5V1Q9UGF6 321 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 NDRG3Q9UGV2 375 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
VPS52-212ENST00000445902 ZNF443Q9Y2A4 671 aaPredicted RBP12.86□□□□□ -0.35
VPS52-212ENST00000445902 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 TICRRQ7Z2Z1 1910 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 ZNF254O75437 659 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 IL5P05113 134 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 PPP2CBP62714 309 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 PPP2CAP67775 309 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 SIRPAP78324 504 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 TMEM17Q86X19 198 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 SDR9C7Q8NEX9 313 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 OR6K3Q8NGY3 331 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 OR4C6Q8NH72 309 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 DVL3Q92997 716 aaPredicted RBP12.85□□□□□ -0.35
VPS52-212ENST00000445902 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 SLC35A4Q96G79 324 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 TSPAN10Q9H1Z9 355 aaPredicted RBP12.85□□□□□ -0.35
VPS52-212ENST00000445902 BARX1Q9HBU1 254 aaPredicted RBP12.85□□□□□ -0.35
VPS52-212ENST00000445902 SLC22A11Q9NSA0 550 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 A0A0A6YYD5 115 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 TRAV20A0A0B4J274 112 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 AQP8O94778 261 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 HTR2AP28223 471 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 ACADLP28330 430 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 TAS2R20P59543 309 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 GUCA2AQ02747 115 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 NDUFAF6Q330K2 333 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 PWWP2BQ6NUJ5 590 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 OVCH1Q7RTY7 1134 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 ZNF546Q86UE3 836 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 NANPQ8TBE9 248 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 ADAMTS15Q8TE58 950 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
VPS52-212ENST00000445902 SLC25A32Q9H2D1 315 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 IL21RQ9HBE5 538 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 TM7SF3Q9NS93 570 aa12.85□□□□□ -0.35
VPS52-212ENST00000445902 MKI67P46013 3256 aaKnown RBP12.85□□□□□ -0.35
VPS52-212ENST00000445902 ERI3O43414 337 aaKnown RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 F3P13726 295 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 ITPKBP27987 946 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 POLR2GP62487 172 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPS52-212ENST00000445902 MLC1Q15049 377 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 MRM1Q6IN84 353 aaKnown RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 RAB11FIP2Q7L804 512 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 OR4K13Q8NH42 304 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 GRHL3Q8TE85 626 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 TMEM239Q8WW34 195 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 IL21Q9HBE4 155 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 RASL12Q9NYN1 266 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 KPNA3O00505 521 aaPredicted RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 IMPA2O14732 288 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 ITGA10O75578 1167 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 AIFM1O95831 613 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 APOC1P02654 83 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 SPP1P10451 314 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 CNR1P21554 472 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 SOX2P48431 317 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms