RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PCP4L1A6NKN8 68 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 VSTM2BA6NLU5 285 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 TEX46H3BTG2 121 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 ARHGDIBP52566 201 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 PCBP3P57721 371 aaKnown RBP15.42■□□□□ 0.06
TCOF1-206ENST00000445265 GLO1Q04760 184 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 MANEAQ5SRI9 462 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 OR2A1Q8NGT9 310 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 SLC6A7Q99884 636 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 ATP13A2Q9NQ11 1180 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 FBXO9Q9UK97 447 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-206ENST00000445265 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 FCMRO60667 390 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 APOC3P02656 99 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 ELK1P19419 428 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 DUSP8Q13202 625 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 DPY19L2P2Q6ZN68 376 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 C10orf111Q8N326 155 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 GIMAP5Q96F15 307 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 METTL17Q9H7H0 456 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-206ENST00000445265 INIPQ9NRY2 104 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 NR0B1P51843 470 aaKnown RBP15.42■□□□□ 0.06
TCOF1-206ENST00000445265 HNRNPKP61978 463 aaKnown RBP eCLIP15.42■□□□□ 0.06
TCOF1-206ENST00000445265 VN1R3Q9BXE9 311 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 FGF22Q9HCT0 170 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 C2orf42Q9NWW7 574 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 SERINC4A6NH21 518 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 EFCAB7A8K855 629 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 LTBQ06643 244 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 GPR176Q14439 515 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 CD276Q5ZPR3 534 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 TIGD3Q6B0B8 471 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 NIPAL3Q6P499 406 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 PLXDC1Q8IUK5 500 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 WDFY2Q96P53 400 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 CA5BQ9Y2D0 317 aa15.42■□□□□ 0.06
TCOF1-206ENST00000445265 C9J4A7 227 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 OR8G3PP0DMU2 310 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 SPNP16150 400 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 RBMXP38159 391 aaKnown RBP15.41■□□□□ 0.06
TCOF1-206ENST00000445265 POU4F3Q15319 338 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 CNRIP1Q96F85 164 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-206ENST00000445265 SPHK1Q9NYA1 384 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 PPP4R1LQ9P1A2 415 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 A6NIZ1 184 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 SURF4O15260 269 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 SSTR2P30874 369 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 RAP1BP61224 184 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 RAP1AP62834 184 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 CCDC58Q4VC31 144 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 FOXRED2Q8IWF2 684 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 TMEM99Q8N816 258 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 OR7G2Q8NG99 324 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 OR14A2Q96R54 314 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 ADOQ96SZ5 270 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 CNTRLQ7Z7A1 2325 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 ANKRD34BA5PLL1 514 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 H7C2Y5 167 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 EIF2B1Q14232 305 aaKnown RBP15.41■□□□□ 0.06
TCOF1-206ENST00000445265 GPR18Q14330 331 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 Q499Y3 187 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 TRMT12Q53H54 448 aaKnown RBP15.41■□□□□ 0.06
TCOF1-206ENST00000445265 LILRA6Q6PI73 481 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 PFN4Q8NHR9 129 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 NMNAT3Q96T66 252 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 MFFQ9GZY8 342 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 SLC39A1Q9NY26 324 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 TRABD2BA6NFA1 517 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 TDGQ13569 410 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 CDKN3Q16667 212 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 GLB1L2Q8IW92 636 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 IL17RDQ8NFM7 739 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 GPR32P1Q8NGA4 272 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 EMC3Q9P0I2 261 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 GSKIPQ9P0R6 139 aa15.41■□□□□ 0.06
TCOF1-206ENST00000445265 A0A0A6YYD5 115 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ALX3O95076 343 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ATP1B1P05026 303 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 HTR2AP28223 471 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 NUDT1P36639 197 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 P2RY14Q15391 338 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 SLC35D3Q5M8T2 416 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 TMEM201Q5SNT2 666 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 CMIPQ8IY22 773 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ASB17Q8WXJ9 295 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 NOX4Q9NPH5 578 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 TMEM72A0PK05 275 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 DCDC2BA2VCK2 349 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 LINC01553A4QN01 128 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ZNF736B4DX44 427 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-206ENST00000445265 KIAA1024LP59773 190 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 GPR155Q7Z3F1 870 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 EID2Q8N6I1 236 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 OR5L2Q8NGL0 311 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 STOML3Q8TAV4 291 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ZFAND1Q8TCF1 268 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 FCRL1Q96LA6 429 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 OR2A14Q96R47 310 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ZNF436Q9C0F3 470 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-206ENST00000445265 HHLA2Q9UM44 414 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms