RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 CFAP73A6NFT4 308 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 TM9SF1O15321 606 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
SEC13-213ENST00000445064 IFNA2P01563 188 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 NR2F1P10589 423 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
SEC13-213ENST00000445064 SLC1A3P43003 542 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 EPS8Q12929 822 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 CEACAM7Q14002 265 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 OTUD3Q5T2D3 398 aaPredicted RBP13.53□□□□□ -0.24
SEC13-213ENST00000445064 MRPL2Q5T653 305 aaKnown RBP13.53□□□□□ -0.24
SEC13-213ENST00000445064 OGFOD2Q6N063 350 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 CLEC2AQ6UVW9 174 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 ZNF525Q8N782 197 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 TRIML2Q8N7C3 387 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 TMEM99Q8N816 258 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 TNFRSF13CQ96RJ3 184 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 PAIP2Q9BPZ3 127 aaKnown RBP13.53□□□□□ -0.24
SEC13-213ENST00000445064 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
SEC13-213ENST00000445064 AMBRA1Q9C0C7 1298 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 ADAM19Q9H013 955 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 CENPHQ9H3R5 247 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 SSU72Q9NP77 194 aaKnown RBP13.53□□□□□ -0.24
SEC13-213ENST00000445064 AIG1Q9NVV5 245 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 DCTN4Q9UJW0 460 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 SLC9A8Q9Y2E8 581 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 RTTNQ86VV8 2226 aa13.53□□□□□ -0.24
SEC13-213ENST00000445064 RNF212BA8MTL3 300 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 SDHDO14521 159 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 AKR7A3O95154 331 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 PGRP06401 933 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 DBIP07108 87 aaKnown RBP13.52□□□□□ -0.25
SEC13-213ENST00000445064 GKN3PP0CG01 181 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 RPS4Y1P22090 263 aaKnown RBP13.52□□□□□ -0.25
SEC13-213ENST00000445064 CXCR1P25024 350 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.25
SEC13-213ENST00000445064 ANXA11P50995 505 aaKnown RBP13.52□□□□□ -0.25
SEC13-213ENST00000445064 DSCR9P59020 149 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 BST1Q10588 318 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 GNA13Q14344 377 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 TMEM249Q2WGJ8 235 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 CHRFAM7AQ494W8 412 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 ZNF544Q6NX49 715 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 PAQR6Q6TCH4 344 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 AAED1Q7RTV5 226 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 VRK2Q86Y07 508 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 MREGQ8N565 214 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 ZIC4Q8N9L1 334 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 NANOS1Q8WY41 292 aaKnown RBP13.52□□□□□ -0.25
SEC13-213ENST00000445064 ZNF385AQ96PM9 386 aaKnown RBP13.52□□□□□ -0.25
SEC13-213ENST00000445064 WDR55Q9H6Y2 383 aaPredicted RBP13.52□□□□□ -0.25
SEC13-213ENST00000445064 MANSC1Q9H8J5 431 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 FKRPQ9H9S5 495 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 AMDHD2Q9Y303 409 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 GPR45Q9Y5Y3 372 aa13.52□□□□□ -0.25
SEC13-213ENST00000445064 ALPK2Q86TB3 2170 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 ELOA3DA6NLF2 546 aaPredicted RBP13.51□□□□□ -0.25
SEC13-213ENST00000445064 H7C417 338 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 FAAHO00519 579 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 KLF11O14901 512 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 LY6HO94772 140 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 GPIP06744 558 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 MPGP29372 298 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 ACAA2P42765 397 aaKnown RBP13.51□□□□□ -0.25
SEC13-213ENST00000445064 MAP2K6P52564 334 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 PRPS1P60891 318 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 TGFBR3Q03167 851 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 CHRNB3Q05901 458 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 LOXL1Q08397 574 aaPredicted RBP13.51□□□□□ -0.25
SEC13-213ENST00000445064 BNIP2Q12982 314 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 OR7A5Q15622 319 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 MAPK11Q15759 364 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 GSTA3Q16772 222 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 ELOA3BQ3SY89 546 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 C6orf52Q5T4I8 152 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 TMEM225Q6GV28 225 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 SPATA19Q7Z5L4 167 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 PEX5LQ8IYB4 626 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 KIRREL3Q8IZU9 778 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 C17orf78Q8N4C9 275 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 C1orf162Q8NEQ5 155 aaPredicted RBP13.51□□□□□ -0.25
SEC13-213ENST00000445064 ELOA3Q8NG57 546 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 FAM168AQ92567 244 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 AURKBQ96GD4 344 aaPredicted RBP13.51□□□□□ -0.25
SEC13-213ENST00000445064 SLC6A13Q9NSD5 602 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 MOKQ9UQ07 419 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 ABCA1O95477 2261 aa13.51□□□□□ -0.25
SEC13-213ENST00000445064 LIPT2A6NK58 231 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 ATP6V1G2-DDX39BF2Z307 99 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 UQCRBP14927 111 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 SLC25A16P16260 332 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 EPHA3P29320 983 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 EFNA4P52798 201 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 TXNL4AP83876 142 aaKnown RBP13.5□□□□□ -0.25
SEC13-213ENST00000445064 HIKESHIQ53FT3 197 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 ZNF836Q6ZNA1 936 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 GPAT4Q86UL3 456 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms