RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 C22orf34Q6ZV56 151 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 LURAP1LQ8IV03 231 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 ZNF100Q8IYN0 542 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 PCYOX1LQ8NBM8 494 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 OR8J3Q8NGG0 315 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 OR10A6Q8NH74 314 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 USB1Q9BQ65 265 aaKnown RBP16.52■□□□□ 0.24
CCDC188-202ENST00000444532 TRIM2Q9C040 744 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 ACTR6Q9GZN1 396 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 PLEKHF2Q9H8W4 249 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 GID8Q9NWU2 228 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 ST6GALNAC2Q9UJ37 374 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 ITGB1BP2Q9UKP3 347 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 NOSIPQ9Y314 301 aaKnown RBP16.52■□□□□ 0.24
CCDC188-202ENST00000444532 CAPN7Q9Y6W3 813 aa16.52■□□□□ 0.24
CCDC188-202ENST00000444532 CSMD1Q96PZ7 3565 aa16.52■□□□□ 0.23
CCDC188-202ENST00000444532 SPG11Q96JI7 2443 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 LOC100653049A0A140TA62 436 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 DEFB108AA8MXU0 73 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 TMEM229AB2RXF0 380 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 M0QX08 132 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 NPIPB7O75200 414 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 KRT34O76011 436 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 ADAP00813 363 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 DMTNQ08495 405 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 ITGADQ13349 1161 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 GLIPR1L2Q4G1C9 344 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 INTS11Q5TA45 600 aaKnown RBP16.51■□□□□ 0.23
CCDC188-202ENST00000444532 C1orf140Q5VVS0 124 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 REP15Q6BDI9 236 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 C6orf89Q6UWU4 347 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 PATL1Q86TB9 770 aaKnown RBP16.51■□□□□ 0.23
CCDC188-202ENST00000444532 COMTD1Q86VU5 262 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 SNX32Q86XE0 403 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 OR52E4Q8NGH9 312 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 DNAJA4Q8WW22 397 aaPredicted RBP16.51■□□□□ 0.23
CCDC188-202ENST00000444532 ZC3HAV1LQ96H79 300 aaKnown RBP16.51■□□□□ 0.23
CCDC188-202ENST00000444532 TAPBPLQ9BX59 468 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 LIME1Q9H400 295 aa16.51■□□□□ 0.23
CCDC188-202ENST00000444532 C6orf203Q9P0P8 240 aaPredicted RBP16.51■□□□□ 0.23
CCDC188-202ENST00000444532 TESQ9UGI8 421 aaKnown RBP16.51■□□□□ 0.23
CCDC188-202ENST00000444532 ELOA3DA6NLF2 546 aaPredicted RBP16.5■□□□□ 0.23
CCDC188-202ENST00000444532 FXYD1O00168 92 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 CCDC22O60826 627 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 RAMP1O60894 148 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 THBDP07204 575 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 C8BP07358 591 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 PNMTP11086 282 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 PCGF2P35227 344 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 GZMMP51124 257 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 RGS8P57771 180 aaPredicted RBP16.5■□□□□ 0.23
CCDC188-202ENST00000444532 NCALDP61601 193 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 SLC17A1Q14916 467 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 POU4F3Q15319 338 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 OR7A5Q15622 319 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 VMACQ2NL98 169 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 ELOA3BQ3SY89 546 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 OTUD3Q5T2D3 398 aaPredicted RBP16.5■□□□□ 0.23
CCDC188-202ENST00000444532 FAM91A1Q658Y4 838 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 ULK3Q6PHR2 472 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 ELOA3Q8NG57 546 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 ECSITQ9BQ95 431 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 SF3B5Q9BWJ5 86 aaKnown RBP16.5■□□□□ 0.23
CCDC188-202ENST00000444532 PIF1Q9H611 641 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 TMEM27Q9HBJ8 222 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 PARPBPQ9NWS1 579 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 PRSS50Q9UI38 385 aa16.5■□□□□ 0.23
CCDC188-202ENST00000444532 ABCA4P78363 2273 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 A0A1B0GWA3 101 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 SIAH2O43255 324 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 MRPL33O75394 65 aaKnown RBP16.49■□□□□ 0.23
CCDC188-202ENST00000444532 AKR7A3O95154 331 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 LGI1O95970 557 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 IL32P24001 234 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 DNASE1P24855 282 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 HTR2AP28223 471 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 TESK1Q15569 626 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 RABL3Q5HYI8 236 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 ALG10BQ5I7T1 473 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 FBXW9Q5XUX1 488 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 C5orf46Q6UWT4 87 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 RANBP3LQ86VV4 465 aaPredicted RBP16.49■□□□□ 0.23
CCDC188-202ENST00000444532 CALHM3Q86XJ0 350 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 TMEM99Q8N816 258 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 SMYD1Q8NB12 490 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 MFSD8Q8NHS3 518 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 RP9Q8TA86 221 aaKnown RBP16.49■□□□□ 0.23
CCDC188-202ENST00000444532 RASSF5Q8WWW0 418 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 HSD17B8Q92506 261 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 KISS1RQ969F8 398 aaPredicted RBP16.49■□□□□ 0.23
CCDC188-202ENST00000444532 SLC38A4Q969I6 547 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 APH1AQ96BI3 265 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 S100PBPQ96BU1 408 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 PIK3IP1Q96FE7 263 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 SLC47A1Q96FL8 570 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 SELENONQ9NZV5 590 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 SLC9A8Q9Y2E8 581 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 FLVCR1Q9Y5Y0 555 aa16.49■□□□□ 0.23
CCDC188-202ENST00000444532 AQP7P3A6NL99 342 aa16.48■□□□□ 0.23
CCDC188-202ENST00000444532 KLF4O43474 513 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms